UniProt Q9RZA4
Bacteriophytochrome (Q9RZA4)
Bacteriophytochrome (UniProt Q9RZA4), EC 2.7.13.3: 76 experimental structures and 1 predicted model on GenesisL1, 6 ligands bound, 178 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q9RZA4
- Protein
- Bacteriophytochrome
- EC
- 2.7.13.3
- Experimental structures
- 76
- Predicted models
- 1
- Ligands
- 6
- Pockets
- 178 · 17 records with a druggable one
Structures
77 records of Q9RZA4 in the MolNFT archive: 76 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 1ZTU | Structure of the chromophore binding domain of bacterial phytochrome | x-ray diffraction | A | — | — |
| 1ZTU | Structure of the chromophore binding domain of bacterial phytochrome | x-ray diffraction | A | — | — |
| 2O9B | Crystal Structure of Bacteriophytochrome chromophore binding domain | x-ray diffraction | A | — | — |
| 2O9B | Crystal structure of bacteriophytochrome chromophore binding domain | x-ray diffraction | A | — | — |
| 2O9C | Crystal Structure of Bacteriophytochrome chromophore binding domain at 1.45 angstrom resolution | x-ray diffraction | A | — | — |
| 2O9C | Crystal structure of bacteriophytochrome chromophore binding domain at 1.45 ångström resolution | x-ray diffraction | A | — | — |
| 3S7N | Crystal Structure of the alternate His 207 conformation of the Infrared Fluorescent D207H variant… | x-ray diffraction | A | — | — |
| 3S7N | Crystal structure of the alternate his 207 conformation of the infrared fluorescent D207H variant… | x-ray diffraction | A | — | — |
| 3S7O | Crystal Structure of the Infrared Fluorescent D207H variant of Deinococcus Bacteriophytochrome… | x-ray diffraction | A | — | — |
| 3S7O | Crystal structure of the infrared fluorescent D207H variant of deinococcus bacteriophytochrome… | x-ray diffraction | A | — | — |
| 3S7P | Crystal Structure of the Infrared Fluorescent D207H variant of Deinococcus Bacteriophytochrome… | x-ray diffraction | A | — | — |
| 3S7P | Crystal structure of the infrared fluorescent D207H variant of deinococcus bacteriophytochrome… | x-ray diffraction | A | — | — |
| 3S7Q | Crystal Structure of a Monomeric Infrared Fluorescent Deinococcus radiodurans Bacteriophytochrome… | x-ray diffraction | A | — | — |
| 3S7Q | Crystal structure of a monomeric infrared fluorescent deinococcus radiodurans bacteriophytochrome… | x-ray diffraction | A | — | — |
| 4CQH | Structure of Infrared Fluorescent Protein IFP2.0 | x-ray diffraction | A | — | — |
| 4CQH | Structure of infrared fluorescent protein IFP2.0 | x-ray diffraction | A | — | — |
| 4IJG | Crystal structure of monomeric bacteriophytochrome | x-ray diffraction | A | — | — |
| 4IJG | Crystal structure of monomeric bacteriophytochrome | x-ray diffraction | A | — | — |
| 4O01 | Crystal Structure of D. radiodurans Bacteriophytochrome Photosensory Core Module in its Illuminated… | x-ray diffraction | A, B, C, D | — | — |
| 4O01 | Crystal structure of D. radiodurans bacteriophytochrome photosensory core module in its illuminated… | x-ray diffraction | A, B, C, D | — | — |
| 4O0P | Crystal Structure of D. radiodurans Bacteriophytochrome Photosensory Core Module in its Dark Form | x-ray diffraction | A, B | — | — |
| 4O0P | Crystal structure of D. radiodurans bacteriophytochrome photosensory core module in its dark form | x-ray diffraction | A, B | — | — |
| 4O8G | Structure of Infrared Fluorescent Protein 1.4 | x-ray diffraction | A | — | — |
| 4O8G | Structure of infrared fluorescent protein 1.4 | x-ray diffraction | A | — | — |
| 4Q0H | Deinococcus radiodurans BphP PAS-GAF | x-ray diffraction | A | — | — |
| 4Q0H | Deinococcus radiodurans bphp pas-gaf | x-ray diffraction | A | — | — |
| 4Q0I | Deinococcus radiodurans BphP PAS-GAF D207A mutant | x-ray diffraction | A | — | — |
| 4Q0I | Deinococcus radiodurans bphp pas-gaf D207A mutant | x-ray diffraction | A | — | — |
| 4Q0J | Deinococcus radiodurans BphP photosensory module | x-ray diffraction | A | — | — |
| 4Q0J | Deinococcus radiodurans bphp photosensory module | x-ray diffraction | A | — | — |
| 4Y3I | PAS-GAF fragment from Deinococcus radiodurans BphP assembled with BV - Y307S, low dose | x-ray diffraction | A | — | — |
| 4Y3I | Pas-gaf fragment from deinococcus radiodurans bphp assembled with bv - Y307S, low dose | x-ray diffraction | A | — | — |
| 4Y5F | PAS-GAF fragment from Deinococcus radiodurans BphP assembled with BV - Y307S, high dose | x-ray diffraction | A | — | — |
| 4Y5F | Pas-gaf fragment from deinococcus radiodurans bphp assembled with bv - Y307S, high dose | x-ray diffraction | A | — | — |
| 4Z1W | CRYSTAL STRUCTURE OF MONOMERIC BACTERIOPHYTOCHROME mutant D207L Y263F From Synchrotron | x-ray diffraction | A | — | — |
| 4Z1W | Crystal structure of monomeric bacteriophytochrome mutant D207L Y263F from synchrotron | x-ray diffraction | A | — | — |
| 4ZRR | Crystal Structure of Monomeric Bacteriophytochrome mutant D207L Y263F at 1.5 A resolution Using a… | x-ray diffraction | A | — | — |
| 4ZRR | Crystal structure of monomeric bacteriophytochrome mutant D207L Y263F at 1.5 a resolution using a… | x-ray diffraction | A | — | — |
| 5AJG | Structure of Infrared Fluorescent Protein IFP1.4 AT 1.11 Angstrom resolution | x-ray diffraction | A | — | — |
| 5AJG | Structure of infrared fluorescent protein IFP1.4 at 1.11 ångström resolution | x-ray diffraction | A | — | — |
| 5C5K | Structure of the Pfr form of a canonical phytochrome | x-ray diffraction | A, B, C, D | BLA, BGC | 20 (best 0.82) |
| 5C5K | Structure of the pfr form of a canonical phytochrome | x-ray diffraction | A, B, C, D | — | — |
| 5K5B | Wild-type PAS-GAF fragment from Deinococcus radiodurans BphP | x-ray diffraction | A | LBV | — |
| 5K5B | Wild-type pas-gaf fragment from deinococcus radiodurans bphp | x-ray diffraction | A | LBV | — |
| 5L8M | Wild-type PAS-GAF fragment from Deinococcus radiodurans Bphp collected at LCLS | x-ray diffraction | A | LBV | 4 (best 0.79) |
| 5L8M | Wild-type pas-gaf fragment from deinococcus radiodurans bphp collected at lcls | x-ray diffraction | A | LBV | — |
| 5LBR | Wild-type PAS-GAF fragment from Deinococcus radiodurans Bphp collected at SACLA | x-ray diffraction | A | LBV | 3 (best 0.80) |
| 5LBR | Wild-type pas-gaf fragment from deinococcus radiodurans bphp collected at sacla | x-ray diffraction | A | LBV | — |
| 5MG0 | Structure of PAS-GAF fragment of Deinococcus phytochrome by serial femtosecond crystallography | x-ray diffraction | A | LBV, NI, CL | — |
| 5MG0 | Structure of pas-gaf fragment of deinococcus phytochrome by serial femtosecond crystallography | x-ray diffraction | A | LBV, NI, CL | — |
| 5MG1 | Structure of the photosensory module of Deinococcus phytochrome by serial femtosecond X-ray… | x-ray diffraction | A | LBV | 3 (best 0.84) |
| 5MG1 | Structure of the photosensory module of deinococcus phytochrome by serial femtosecond X-ray… | x-ray diffraction | A | LBV | — |
| 5NFX | Deinococcus radiodurans BphP PAS-GAF Y263F mutant | x-ray diffraction | A | LBV | 4 (best 0.79) |
| 5NFX | Deinococcus radiodurans bphp pas-gaf Y263F mutant | x-ray diffraction | A | LBV | — |
| 5NM3 | Deinococcus radiodurans BphP PAS-GAF-PHY Y263F mutant, pre-illuminated | x-ray diffraction | A, B, C, D | LBV | 20 (best 0.81) |
| 5NM3 | Deinococcus radiodurans bphp pas-gaf-phy Y263F mutant, pre-illuminated | x-ray diffraction | A, B, C, D | LBV | — |
| 5NWN | Deinococcus radiodurans BphP PAS-GAF-PHY Y263F mutant, dark | x-ray diffraction | A, B, C, D | LBV | — |
| 5NWN | Deinococcus radiodurans bphp pas-gaf-phy Y263F mutant, dark | x-ray diffraction | A, B, C, D | LBV | — |
| 6FHT | Crystal structure of an artificial phytochrome regulated adenylate/guanylate cyclase in its dark… | x-ray diffraction | A, B | LBV, SO4 | 20 (best 0.82) |
| 6FHT | Crystal structure of an artificial phytochrome regulated ADENYLATE/GUANYLATE cyclase in its dark… | x-ray diffraction | A, B | LBV, SO4 | — |
17 records more on the page itself.
Ligands
- LBV · 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium-2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid · in 33 records
- BLA · Biliverdine IX alpha · in 2 records
- CL · Chloride ion · in 2 records
- NI · Nickel (II) ion · in 2 records
- SO4 · Sulfate ion · in 2 records
- BGC · beta-D-glucopyranose · in 1 record
Experiment against prediction
- 6T3L chain A against the predicted model Q9RZA4: TM-score 0.99, RMSD 0.51 Å
- 6T3L chain A against the predicted model Q9RZA4: TM-score 0.99, RMSD 0.51 Å
- 8C3I chain A against the predicted model Q9RZA4: TM-score 0.99, RMSD 0.54 Å
- 5MG1 chain A against the predicted model Q9RZA4: TM-score 0.99, RMSD 0.69 Å
- 5MG1 chain A against the predicted model Q9RZA4: TM-score 0.99, RMSD 0.69 Å
- 6T3U chain A against the predicted model Q9RZA4: TM-score 0.99, RMSD 0.61 Å
- 6T3U chain A against the predicted model Q9RZA4: TM-score 0.99, RMSD 0.61 Å
- 1ZTU chain A against the predicted model Q9RZA4: TM-score 0.99, RMSD 0.70 Å
- 1ZTU chain A against the predicted model Q9RZA4: TM-score 0.99, RMSD 0.70 Å
- 4Q0J chain A against the predicted model Q9RZA4: TM-score 0.99, RMSD 0.75 Å
Elsewhere
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