UniProt P0ABE7
Soluble cytochrome b562 (P0ABE7)
Soluble cytochrome b562 (UniProt P0ABE7), EC 1.13.12.13, 2.3.1.48: 554 experimental structures and 1 predicted model on GenesisL1, 178 ligands bound, 1,261 pockets. Binding sites, druggability and experiment against prediction…
- UniProt
- P0ABE7
- Protein
- Soluble cytochrome b562
- EC
- 1.13.12.13, 2.3.1.48, 3.2.1.17, 3.2.1.4, 3.5.1.-
- Experimental structures
- 554
- Predicted models
- 1
- Ligands
- 178
- Pockets
- 1,261 · 179 records with a druggable one
Structures
555 records of P0ABE7 in the MolNFT archive: 554 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 1APC | Solution structure of apocytochrome B562 | solution nmr | A | — | — |
| 1APC | Solution structure of apocytochrome B562 | solution nmr | A | — | — |
| 1LM3 | A Multi-generation Analysis of Cytochrome b562 Redox Variants: Evolutionary Strategies for… | x-ray diffraction | B, D | — | — |
| 1LM3 | A multi-generation analysis of cytochrome B562 redox variants: evolutionary strategies for… | x-ray diffraction | B, D | — | — |
| 1M6T | Crystal structure of B562RIL, a redesigned four helix bundle | x-ray diffraction | A | — | — |
| 1M6T | Crystal structure of B562RIL, a redesigned four helix bundle | x-ray diffraction | A | — | — |
| 1QPU | Solution structure of oxidized escherichia COLI cytochrome B562 | solution nmr | A | — | — |
| 1QPU | Solution structure of oxidized escherichia COLI cytochrome B562 | solution nmr | A | — | — |
| 1QQ3 | The solution structure of the heme binding variant ARG98CYS of oxidized escherichia COLI cytochrome… | solution nmr | A | — | — |
| 1QQ3 | The solution structure of the heme binding variant ARG98CYS of oxidized escherichia COLI cytochrome… | solution nmr | A | — | — |
| 256B | Improvement of the 2.5 ångströms resolution model of cytochrome B562 by redetermining the primary… | x-ray diffraction | A, B | — | — |
| 256B | Improvement of the 2.5 ångströms resolution model of cytochrome B562 by redetermining the primary… | x-ray diffraction | A, B | — | — |
| 2BC5 | Crystal structure of E. coli cytochrome b562 with engineered c-type heme linkages | x-ray diffraction | A, B, C, D | — | — |
| 2BC5 | Crystal structure of E. COLI cytochrome B562 with engineered C-type heme linkages | x-ray diffraction | A, B, C, D | — | — |
| 2QLA | Crystal Structure of a 16-Helix Bundle Architecture Produced by the Zinc-Mediated Self Assembly of… | x-ray diffraction | A, B, C, D | — | — |
| 2QLA | Crystal structure of a 16-helix bundle architecture produced by the zinc-mediated self assembly of… | x-ray diffraction | A, B, C, D | — | — |
| 3C62 | Tetrameric Cytochrome cb562 (H59/D62/H63/H73/A74/H77) Assembly Stabilized by Interprotein Zinc… | x-ray diffraction | A, B, C, D | — | — |
| 3C62 | Tetrameric cytochrome CB562 (H59/D62/H63/H73/A74/H77) assembly stabilized by interprotein zinc… | x-ray diffraction | A, B, C, D | — | — |
| 3C63 | Tetrameric Cytochrome cb562 (K34/H59/D62/H63/H73/A74/H77) Assembly Stabilized by Interprotein Zinc… | x-ray diffraction | A, B, C, D | — | — |
| 3C63 | Tetrameric cytochrome CB562 (K34/H59/D62/H63/H73/A74/H77) assembly stabilized by interprotein zinc… | x-ray diffraction | A, B, C, D | — | — |
| 3DE8 | Crystal Structure of a Dimeric Cytochrome cb562 Assembly Induced by Copper Coordination | x-ray diffraction | A, B, C, D | — | — |
| 3DE8 | Crystal structure of a dimeric cytochrome CB562 assembly induced by copper coordination | x-ray diffraction | A, B, C, D | — | — |
| 3DE9 | Crystal Structure of a Trimeric Cytochrome cb562 Assembly Induced by Nickel Coordination | x-ray diffraction | A | — | — |
| 3DE9 | Crystal structure of a trimeric cytochrome CB562 assembly induced by nickel coordination | x-ray diffraction | A | — | — |
| 3FOO | A Triangular Cytochrome b562 Superstructure Mediated by Ni Coordination - Monoclinic Form | x-ray diffraction | A, B, C, D, E, F, G, H, I, J, K, L | — | — |
| 3FOO | A triangular cytochrome B562 superstructure mediated by ni coordination - monoclinic form | x-ray diffraction | A, B, C, D, E, F, G, H, I, J, K, L | — | — |
| 3FOP | A Triangular Cytochrome b562 Superstructure Mediated by Ni Coordination - Hexagonal Form | x-ray diffraction | A, B | — | — |
| 3FOP | A triangular cytochrome B562 superstructure mediated by ni coordination - hexagonal form | x-ray diffraction | A, B | — | — |
| 3HNI | Crystal structure of the Zn-induced tetramer of the engineered cyt cb562 variant RIDC-1 | x-ray diffraction | A, B, C, D, E, F, G, H | — | — |
| 3HNI | Crystal structure of the zn-induced tetramer of the engineered cyt CB562 variant ridc-1 | x-ray diffraction | A, B, C, D, E, F, G, H | — | — |
| 3HNJ | Crystal structure of the Zn-induced tetramer of the engineered cyt cb562 variant RIDC-2 | x-ray diffraction | A, B, C, D | — | — |
| 3HNJ | Crystal structure of the zn-induced tetramer of the engineered cyt CB562 variant ridc-2 | x-ray diffraction | A, B, C, D | — | — |
| 3HNK | Crystal structure of the dimeric assembly of the cyt cb562 variant RIDC-1 | x-ray diffraction | A, B | — | — |
| 3HNK | Crystal structure of the dimeric assembly of the cyt CB562 variant ridc-1 | x-ray diffraction | A, B | — | — |
| 3HNL | Crystal structure of the Cu-induced dimer of the engineered cyt cb562 variant RIDC-1 | x-ray diffraction | A, B | — | — |
| 3HNL | Crystal structure of the cu-induced dimer of the engineered cyt CB562 variant ridc-1 | x-ray diffraction | A, B | — | — |
| 3IQ5 | Crystal structure of an engineered metal-free tetrameric cytochrome cb562 complex templated by… | x-ray diffraction | A, B, C, D | — | — |
| 3IQ5 | Crystal structure of an engineered metal-free tetrameric cytochrome CB562 complex templated by… | x-ray diffraction | A, B, C, D | — | — |
| 3IQ6 | Crystal structure of a tetrameric Zn-bound cytochrome cb562 complex with covalently and… | x-ray diffraction | A, B, C, D, E, F, G, H | — | — |
| 3IQ6 | Crystal structure of a tetrameric zn-bound cytochrome CB562 complex with covalently and… | x-ray diffraction | A, B, C, D, E, F, G, H | — | — |
| 3L1M | Crystal Structure of a Ni-directed Dimer of Cytochrome cb562 with a Quinolate-Histidine Hybrid… | x-ray diffraction | A | — | — |
| 3L1M | Crystal structure of a ni-directed dimer of cytochrome CB562 with a quinolate-histidine hybrid… | x-ray diffraction | A | — | — |
| 3M15 | A Zn-mediated asymmetric trimer of a cytochrome cb562 variant (D74A-RIDC1) | x-ray diffraction | A, B, C | — | — |
| 3M15 | A zn-mediated asymmetric trimer of a cytochrome CB562 variant (D74A- RIDC1) | x-ray diffraction | A, B, C | — | — |
| 3M4B | A Zn-mediated tetrahedral protein lattice cage | x-ray diffraction | A, B, C, D | — | — |
| 3M4B | A zn-mediated tetrahedral protein lattice cage | x-ray diffraction | A, B, C, D | — | — |
| 3M4C | A Zn-mediated tetrahedral protein lattice cage encapsulating a microperoxidase | x-ray diffraction | A, B, C, D | — | — |
| 3M4C | A zn-mediated tetrahedral protein lattice cage encapsulating a microperoxidase | x-ray diffraction | A, B, C, D | — | — |
| 3M79 | A tetrameric Zn-bound cytochrome cb562 complex with covalently and non-covalently stabilized… | x-ray diffraction | A, B, C, D, E, F, G, H | — | — |
| 3M79 | A tetrameric zn-bound cytochrome CB562 complex with covalently and non-covalently stabilized… | x-ray diffraction | A, B, C, D, E, F, G, H | — | — |
| 3NMI | Crystal structure of the phenanthroline-modified cytochrome cb562 variant, MBP-Phen2 | x-ray diffraction | A, B, C, D, E, F | — | — |
| 3NMI | Crystal structure of the phenanthroline-modified cytochrome CB562 variant, mbp-PHEN2 | x-ray diffraction | A, B, C, D, E, F | — | — |
| 3NMJ | Crystal structure of a nickel mediated dimer for the phenanthroline-modified cytochrome cb562… | x-ray diffraction | A, B, C, D | — | — |
| 3NMJ | Crystal structure of a nickel mediated dimer for the phenanthroline- modified cytochrome CB562… | x-ray diffraction | A, B, C, D | — | — |
| 3NMK | Crystal structure of a zinc mediated dimer for the phenanthroline-modified cytochrome cb562… | x-ray diffraction | A, B, C, D | — | — |
| 3NMK | Crystal structure of a zinc mediated dimer for the phenanthroline- modified cytochrome CB562… | x-ray diffraction | A, B, C, D | — | — |
| 3TOL | Crystal structure of an engineered cytochrome cb562 that forms 1D, Zn-mediated coordination polymers | x-ray diffraction | A, C, D, B | — | — |
| 3TOL | Crystal structure of an engineered cytochrome CB562 that forms 1D, zn- mediated coordination… | x-ray diffraction | A, C, D, B | — | — |
| 3TOM | Crystal structure of an engineered cytochrome cb562 that forms 2D, Zn-mediated sheets | x-ray diffraction | A, B, C, D | — | — |
| 3TOM | Crystal structure of an engineered cytochrome CB562 that forms 2D, zn- mediated sheets | x-ray diffraction | A, B, C, D | — | — |
495 records more on the page itself.
Ligands
- CLR · Cholesterol · in 113 records
- OLA · Oleic acid · in 89 records
- HEC · Heme C · in 79 records
- NA · Sodium ion · in 68 records
- CA · Calcium ion · in 38 records
- ZN · Zinc ion · in 38 records
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · in 33 records
- ZMA · 4-{2-[(7-amino-2-furan-2-yl[1,2,4]triazolo[1,5-A][1,3, 5]triazin-5-yl)amino]ethyl}phenol · in 32 records
- OLB · (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate · in 24 records
- CL · Chloride ion · in 22 records
- PLM · Palmitic acid · in 19 records
- MG · Magnesium ion · in 14 records
- CO · Cobalt (II) ion · in 13 records
- CU · Copper (II) ion · in 12 records
- PO4 · Phosphate ion · in 12 records
- FE · Fe (III) ion · in 11 records
- EPJ · Epibatidine · in 10 records
- NI · Nickel (II) ion · in 10 records
- SO4 · Sulfate ion · in 10 records
- SRO · Serotonin · in 10 records
- HAE · Acetohydroxamic acid · in 9 records
- POV · (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate · in 8 records
- MN · Manganese (II) ion · in 7 records
- 9Z9 · (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en · in 6 records
- PEE · 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine · in 6 records
- 7LD · (8alpha)-N,N-diethyl-6-methyl-9,10-didehydroergoline-8-carboxamide · in 5 records
- 8K6 · Octadecane · in 5 records
- D10 · Decane · in 5 records
- D12 · Dodecane · in 5 records
- ER0 · [(2~{R},3~{S})-2,3,4-tris(oxidanyl)butyl] (5~{R},9~{R}, 13~{R})-5,9,13,17-tetramethyloctadecanoate · in 5 records
Experiment against prediction
- 8XV5 chain A against the predicted model Q9BZV2: TM-score 0.98, RMSD 0.99 Å
- 7MYZ chain D against the predicted model Q08722: TM-score 0.98, RMSD 0.55 Å
- 3NMJ chain B against the predicted model P0ABE7: TM-score 0.98, RMSD 0.54 Å
- 3NMJ chain B against the predicted model P0ABE7: TM-score 0.98, RMSD 0.54 Å
- 6DYG chain B against the predicted model P0ABE7: TM-score 0.98, RMSD 0.82 Å
- 6DYG chain B against the predicted model P0ABE7: TM-score 0.98, RMSD 0.82 Å
- 7SU2 chain D against the predicted model P0ABE7: TM-score 0.98, RMSD 0.83 Å
- 7N4G chain C against the predicted model P0ABE7: TM-score 0.98, RMSD 0.80 Å
- 2BC5 chain B against the predicted model P0ABE7: TM-score 0.98, RMSD 0.81 Å
- 2BC5 chain B against the predicted model P0ABE7: TM-score 0.98, RMSD 0.81 Å
Elsewhere
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