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Ligand · PXX

PXX · N-1,10-phenanthrolin-5-ylacetamide

PXX, N-1,10-phenanthrolin-5-ylacetamide (C14 H11 N3 O, 237.3 g/mol), in the MolNFT structures on GenesisL1: bound in 10 records (5 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…

Component
PXX
Formula
C14 H11 N3 O
Class
ligand
Structures
10
PDB entries
5

Binding sites

PXX in 10 structures; the first of them:

  • 3FOO · A Triangular Cytochrome b562 Superstructure Mediated by Ni Coordination - Monoclinic Form · PXX A151 · binds GLN41, LYS42, ALA43, PRO53, MET58, CYS59, PHE61, ALA62 and 3 more
  • 3FOP · A Triangular Cytochrome b562 Superstructure Mediated by Ni Coordination - Hexagonal Form · PXX A151 · binds GLN41, LYS42, ALA43, THR44, PRO53, MET58, CYS59, PHE61 and 1 more
  • 3NMI · Crystal structure of the phenanthroline-modified cytochrome cb562 variant, MBP-Phen2 · PXX A151 · binds GLN41, LYS42, ALA43, THR44, PRO53, ASP54, MET58, CYS59 and 5 more
  • 3NMJ · Crystal structure of a nickel mediated dimer for the phenanthroline-modified cytochrome… · PXX A151 · binds PRO53, ASP54, CYS59, LYS42, THR44, PRO53, MET58
  • 3NMK · Crystal structure of a zinc mediated dimer for the phenanthroline-modified cytochrome… · PXX A151 · binds PRO53, ASP54, CYS59, LYS42, THR44, PRO53, MET58
  • 3FOO · A triangular cytochrome B562 superstructure mediated by ni coordination - monoclinic form · PXX A151 · binds GLN41, LYS42, ALA43, PRO53, MET58, CYS59, PHE61, ALA62 and 3 more

Residues it binds most

ALA 46, ASP 40, GLN 46, PRO 54, CYS 56, LYS 52, MET 52, PHE 42, THR 36, HIS 24 (residue and the binding sites it lines).

Found with

  • HEM · Protoporphyrin IX containing Fe
  • NI · Nickel (II) ion
  • ZN · Zinc ion
  • ACT · Acetate ion

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