UniProt P06009
Reaction center protein L chain (P06009)
Reaction center protein L chain (UniProt P06009): 62 experimental structures and 1 predicted model on GenesisL1, 19 ligands bound, 107 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P06009
- Protein
- Reaction center protein L chain
- Experimental structures
- 62
- Predicted models
- 1
- Ligands
- 19
- Pockets
- 107 · 9 records with a druggable one
Structures
63 records of P06009 in the MolNFT archive: 62 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 1DXR | Photosynthetic reaction center from Rhodopseudomonas viridis - His L168 Phe mutant (terbutryn… | x-ray diffraction | L | — | — |
| 1DXR | Photosynthetic reaction center from rhodopseudomonas viridis - his L168 phe mutant (terbutryn… | x-ray diffraction | L | — | — |
| 1PRC | Crystallographic refinement at 2.3 ångströms resolution and refined model of the photosynthetic… | x-ray diffraction | L | — | — |
| 1PRC | Crystallographic refinement at 2.3 ångströms resolution and refined model of the photosynthetic… | x-ray diffraction | L | — | — |
| 1R2C | Photosynthetic reaction center blastochloris viridis (atcc) | x-ray diffraction | C | — | — |
| 1R2C | Photosynthetic reaction center blastochloris viridis (atcc) | x-ray diffraction | C | — | — |
| 1VRN | Photosynthetic reaction center blastochloris viridis (atcc) | x-ray diffraction | L | — | — |
| 1VRN | Photosynthetic reaction center blastochloris viridis (atcc) | x-ray diffraction | L | — | — |
| 2I5N | 1.96 A X-ray structure of photosynthetic reaction center from Rhodopseudomonas viridis:Crystals… | x-ray diffraction | L | — | — |
| 2I5N | 1.96 a X-ray structure of photosynthetic reaction center from rhodopseudomonas VIRIDIS:CRYSTALS… | x-ray diffraction | L | — | — |
| 2JBL | Photosynthetic reaction center from blastochloris viridis | x-ray diffraction | L | — | — |
| 2JBL | Photosynthetic reaction center from blastochloris viridis | x-ray diffraction | L | — | — |
| 2PRC | Photosynthetic reaction center from rhodopseudomonas viridis (ubiquinone-2 complex) | x-ray diffraction | L | — | — |
| 2PRC | Photosynthetic reaction center from rhodopseudomonas viridis (ubiquinone-2 complex) | x-ray diffraction | L | — | — |
| 2WJM | Lipidic sponge phase crystal structure of the photosynthetic reaction centre from Blastochloris… | x-ray diffraction | L | — | — |
| 2WJM | Lipidic sponge phase crystal structure of the photosynthetic reaction centre from blastochloris… | x-ray diffraction | L | — | — |
| 2WJN | Lipidic sponge phase crystal structure of photosynthetic reaction centre from Blastochloris viridis… | x-ray diffraction | L | — | — |
| 2WJN | Lipidic sponge phase crystal structure of photosynthetic reaction centre from blastochloris viridis… | x-ray diffraction | L | — | — |
| 2X5U | 80 microsecond Laue diffraction snapshot from crystals of a photosynthetic reaction centre without… | x-ray diffraction | L | — | — |
| 2X5U | 80 microsecond laue diffraction snapshot from crystals of a photosynthetic reaction centre without… | x-ray diffraction | L | — | — |
| 2X5V | 80 microsecond laue diffraction snapshot from crystals of a photosynthetic reaction centre 3… | x-ray diffraction | L | — | — |
| 2X5V | 80 microsecond laue diffraction snapshot from crystals of a photosynthetic reaction centre 3… | x-ray diffraction | L | — | — |
| 3D38 | Crystal structure of new trigonal form of photosynthetic reaction center from Blastochloris… | x-ray diffraction | L | — | — |
| 3D38 | Crystal structure of new trigonal form of photosynthetic reaction center from blastochloris… | x-ray diffraction | L | — | — |
| 3G7F | Crystal structure of Blastochloris viridis heterodimer mutant reaction center | x-ray diffraction | L | — | — |
| 3G7F | Crystal structure of blastochloris viridis heterodimer mutant reaction center | x-ray diffraction | L | — | — |
| 3PRC | Photosynthetic reaction center from rhodopseudomonas viridis (qb-depleted) | x-ray diffraction | L | — | — |
| 3PRC | Photosynthetic reaction center from rhodopseudomonas viridis (qb- depleted) | x-ray diffraction | L | — | — |
| 3T6E | Crystal Structure of the Reaction Centre from Blastochloris viridis strain DSM 133 (ATCC 19567)… | x-ray diffraction | L | — | — |
| 3T6E | Crystal structure of the reaction centre from blastochloris viridis strain dsm 133 (atcc 19567)… | x-ray diffraction | L | — | — |
| 4AC5 | Lipidic sponge phase crystal structure of the Bl. viridis reaction centre solved using serial… | x-ray diffraction | L | — | — |
| 4AC5 | Lipidic sponge phase crystal structure of the bl. viridis reaction centre solved using serial… | x-ray diffraction | L | — | — |
| 4CAS | Serial femtosecond crystallography structure of a photosynthetic reaction center | x-ray diffraction | B | — | — |
| 4CAS | Serial femtosecond crystallography structure of a photosynthetic reaction center | x-ray diffraction | B | — | — |
| 5M7J | Blastochloris viridis photosynthetic reaction center structure using best crystal approach | x-ray diffraction | B | HEC, DGA, BCL, BPB, MPG, FE2 | — |
| 5M7J | Blastochloris viridis photosynthetic reaction center structure using best crystal approach | x-ray diffraction | B | HEC, DGA, BCL, BPB, MPG, FE2 | — |
| 5M7K | Blastochloris viridis photosynthetic reaction center - RC_VIR_XFEL | x-ray diffraction | B | HEC, DGA, BCL, BPB, MPG, FE2 | — |
| 5M7L | Blastochloris viridis photosynthetic reaction center synchrotron structure | x-ray diffraction | B | DGA, BCL, BPB, MPG, FE2, MQ7 | — |
| 5M7L | Blastochloris viridis photosynthetic reaction center synchrotron structure | x-ray diffraction | B | DGA, BCL, BPB, MPG, FE2, MQ7 | — |
| 5NJ4 | From macrocrystals to microcrystals: a strategy for membrane protein serial crystallography | x-ray diffraction | L | HEC, DGA, SO4, BCB, BPB, HTO | 13 (best 0.87) |
| 5NJ4 | From macrocrystals to microcrystals: a strategy for membrane protein serial crystallography | x-ray diffraction | L | HEC, DGA, BCB, BPB, HTO, FE2 | — |
| 5O4C | From macrocrystals to microcrystals: a strategy for membrane protein serial crystallography | x-ray diffraction | L | HEC, DGA, BCB, BPB, HTO, FE2 | — |
| 5O4C | From macrocrystals to microcrystals: a strategy for membrane protein serial crystallography | x-ray diffraction | L | HEC, DGA, BCB, BPB, HTO, FE2 | — |
| 5O64 | From macrocrystals to microcrystals: a strategy for membrane protein serial crystallography | x-ray diffraction | L | HEC, DGA, BCB, BPB, HTO, FE2 | 13 (best 0.87) |
| 5O64 | From macrocrystals to microcrystals: a strategy for membrane protein serial crystallography | x-ray diffraction | L | HEC, DGA, BCB, BPB, HTO, FE2 | — |
| 5PRC | Photosynthetic reaction center from rhodopseudomonas viridis (atrazine complex) | x-ray diffraction | L | HEM, BCB, BPB, ATZ, FE2, SO4 | — |
| 6ET5 | Reaction centre light harvesting complex 1 from Blc. virids | electron microscopy | L | HEM, BCB, BPB, UQ9, FE, SO4 | 6 (best 0.89) |
| 6ET5 | Reaction centre light harvesting complex 1 from blc. virids | electron microscopy | L | BCB, BPB, UQ9, FE, SO4, MQ9 | — |
| 6PRC | Photosynthetic reaction center from rhodopseudomonas viridis (dg-420314 (triazine) complex) | x-ray diffraction | L | HEM, BCB, BPB, CEB, FE2, SO4 | 13 (best 0.88) |
| 6PRC | Photosynthetic reaction center from rhodopseudomonas viridis (dg- 420314 (triazine) complex) | x-ray diffraction | L | HEM, BCB, BPB, CEB, FE2, SO4 | — |
| 6ZHW | Ultrafast structural response to charge redistribution within a photosynthetic reaction centre - 1… | x-ray diffraction | L | HEC, DGA, BCB, BPB, HTO, FE | — |
| 6ZI4 | Ultrafast Structural Response to Charge Redistribution Within a Photosynthetic Reaction Centre - 5… | x-ray diffraction | L | HEC, DGA, BCB, BPB, HTO, FE | 12 (best 0.87) |
| 6ZI4 | Ultrafast structural response to charge redistribution within a photosynthetic reaction centre - 5… | x-ray diffraction | L | HEC, DGA, BCB, BPB, HTO, FE | — |
| 6ZI5 | Ultrafast structural response to charge redistribution within a photosynthetic reaction centre… | x-ray diffraction | L | HEC, DGA, BCB, BPB, HTO, FE | — |
| 6ZI6 | Ultrafast structural response to charge redistribution within a photosynthetic reaction centre - 20… | x-ray diffraction | L | HEC, DGA, BCB, BPB, HTO, FE | — |
| 6ZI9 | Ultrafast structural response to charge redistribution within a photosynthetic reaction centre… | x-ray diffraction | L | HEC, DGA, BCB, BPB, HTO, FE | — |
| 6ZIA | Ultrafast Structural Response to Charge Redistribution Within a Photosynthetic Reaction Centre - 8… | x-ray diffraction | L | HEC, DGA, SO4, BCB, BPB, HTO | 16 (best 0.89) |
| 6ZIA | Ultrafast structural response to charge redistribution within a photosynthetic reaction centre - 8… | x-ray diffraction | L | HEC, DGA, BCB, BPB, HTO, FE | — |
| 6ZID | Ultrafast Structural Response to Charge Redistribution Within a Photosynthetic Reaction Centre - 5… | x-ray diffraction | L | HEC, DGA, SO4, BCB, BPB, HTO | 16 (best 0.89) |
| 6ZID | Ultrafast structural response to charge redistribution within a photosynthetic reaction centre - 5… | x-ray diffraction | L | HEC, DGA, BCB, BPB, HTO, FE | — |
3 records more on the page itself.
Ligands
- BPB · Bacteriopheophytin B · in 28 records
- MQ7 · Menaquinone-7 · in 26 records
- BCB · Bacteriochlorophyll B · in 23 records
- SO4 · Sulfate ion · in 23 records
- DGA · Diacyl glycerol · in 21 records
- HEC · Heme C · in 19 records
- FE2 · Fe (II) ion · in 16 records
- HTO · Heptane-1,2,3-triol · in 16 records
- FE · Fe (III) ion · in 12 records
- BCL · Bacteriochlorophyll A · in 5 records
- HEM · Protoporphyrin IX containing Fe · in 5 records
- MPG · [(Z)-octadec-9-enyl] (2R)-2,3-bis(oxidanyl)propanoate · in 5 records
- OTP · (2E,6E,10E,14E,18E,22E,26E)-3,7,11,15,19,23,27,31-octamethyldotriaconta-2,6,10,14,18,22,26,30-octaenyl trihydrogen diphosphate · in 5 records
- PO4 · Phosphate ion · in 5 records
- CEB · 2-chloro-4-ethylamino-6-(S(-)-2'-cyano-4-butylamino)-1, 3,5-triazine · in 2 records
- CET · 2-chloro-4-ethylamino-6-(R(+)-2'-cyano-4-butylamino)-1, 3,5-triazine · in 2 records
- MQ9 · Menaquinone-9 · in 2 records
- UQ9 · Ubiquinone-9 · in 2 records
- ATZ · 2-chloro-4-isopropylamino-6-ethylamino -1,3,5-triazine · in 1 record
Experiment against prediction
- 1DXR chain L against the predicted model P06009: TM-score 0.99, RMSD 0.63 Å
- 1DXR chain L against the predicted model P06009: TM-score 0.99, RMSD 0.63 Å
- 2JBL chain L against the predicted model P06009: TM-score 0.99, RMSD 0.63 Å
- 2JBL chain L against the predicted model P06009: TM-score 0.99, RMSD 0.63 Å
- 2WJN chain L against the predicted model P06009: TM-score 0.99, RMSD 0.64 Å
- 2WJN chain L against the predicted model P06009: TM-score 0.99, RMSD 0.64 Å
- 5NJ4 chain L against the predicted model P06009: TM-score 0.99, RMSD 0.64 Å
- 5NJ4 chain L against the predicted model P06009: TM-score 0.99, RMSD 0.64 Å
- 2PRC chain L against the predicted model P06009: TM-score 0.99, RMSD 0.64 Å
- 2PRC chain L against the predicted model P06009: TM-score 0.99, RMSD 0.64 Å
Elsewhere
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