GL1X · GenesisL1 explorer

Ligand · OTP

OTP · (2E,6E,10E,14E,18E,22E,26E)-3,7,11,15,19,23,27,31-octamethyldotriaconta-2,6,10,14,18,22,26,30-octaenyl trihydrogen diphosphate

OTP, (2E,6E,10E,14E,18E,22E,26E)-3,7,11,15,19,23,27,31-octamethyldotriaconta-2,6,10,14,18,22,26,30-octaenyl trihydrogen diphosphate (C40 H68 O7 P2, 722.9 g/mol), in the MolNFT structures on GenesisL1: bound in 7 records (5 PDB entries).…

Component
OTP
Formula
C40 H68 O7 P2
Class
ligand
Structures
7
PDB entries
5

Binding sites

OTP in 7 structures; the first of them:

  • 5IXH · Crystal Structure of Burkholderia cenocepacia BcnA · OTP A201 · binds VAL13, ALA15, SER17, GLN19, THR24, PHE28, VAL35, PHE37 and 34 more
  • 5M7J · Blastochloris viridis photosynthetic reaction center structure using best crystal approach · OTP C405 · binds PHE62, LEU151, PRO198, GLY201, PHE202, PHE206, TRP266, TRP295 and 6 more
  • 5M7L · Blastochloris viridis photosynthetic reaction center synchrotron structure · OTP C406 · binds PHE62, PRO198, GLY201, PHE202, PHE206, TRP295, CYS296, ALA301 and 4 more
  • 8PN9 · Structure of human oligosaccharyltransferase OST-A complex bound to NGI-1 · OTP A805 · binds ASN168, GLU169, TRP209, GLY210, GLY211, VAL213, PHE214, ASN217 and 17 more
  • 5M7J · Blastochloris viridis photosynthetic reaction center structure using best crystal approach · OTP C405 · binds PHE62, LEU151, PRO198, GLY201, PHE202, PHE206, TRP266, TRP295 and 6 more
  • 5M7K · Blastochloris viridis photosynthetic reaction center - RC_VIR_XFEL · OTP C406 · binds PHE62, LEU151, PRO198, GLY201, PHE202, PHE206, TRP266, TRP295 and 6 more
  • 5M7L · Blastochloris viridis photosynthetic reaction center synchrotron structure · OTP C406 · binds PHE62, PRO198, GLY201, PHE202, PHE206, TRP295, CYS296, ALA301 and 4 more

Residues it binds most

PHE 8, VAL 8, TRP 8, LEU 6, ILE 2, ALA 5, GLY 6, GLN 7, PRO 6, CYS 5 (residue and the binding sites it lines).

Found with

  • BCL · Bacteriochlorophyll A
  • BPB · Bacteriopheophytin B
  • DGA · Diacyl glycerol
  • HEC · Heme C
  • MPG · [(Z)-octadec-9-enyl] (2R)-2,3-bis(oxidanyl)propanoate
  • MQ7 · Menaquinone-7
  • NS5 · 15-cis-1,2-dihydroneurosporene
  • FE2 · Fe (II) ion
  • PO4 · Phosphate ion
  • EGY · (4R,7R)-4-hydroxy-N,N,N-trimethyl-4,9-dioxo-7-[(undecanoyloxy)methyl]-3,5,8-trioxa-4lambda~5~-phosphadocosan-1-aminium
  • KZB · (2~{S},3~{R},4~{R},5~{S},6~{S})-2-(hydroxymethyl)-6-[(1~{S},2~{R},3~{R},4~{R},5'~{S},6~{S},7~{R},8~{S}, 9~{R},12~{R},13~{R},15~{S},16~{S},18~{R})-5',7,9,13-tetramethyl-3,15-bis(oxidanyl)spiro[5-oxapentacyclo[10.8.0.0^{2,9}.0^{4,8}.0^{13, 18}]icosane-6,2'-oxane]-16-yl]oxy-oxane-3,4,5-triol
  • ZXT · 5-(dimethylsulfamoyl)-~{N}-(5-methyl-1,3-thiazol-2-yl)-2-pyrrolidin-1-yl-benzamide

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.