GL1X · GenesisL1 explorer

Ligand · U9M

U9M · (2R,3R,4S,5S,6S)-6-(dihydroxymethyl)-3,4-dimethoxytetrahydro-2H-pyran-2,5-diol

U9M, (2R,3R,4S,5S,6S)-6-(dihydroxymethyl)-3,4-dimethoxytetrahydro-2H-pyran-2,5-diol (C8 H16 O7, 224.2 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the…

Component
U9M
Formula
C8 H16 O7
Class
sugar
Structures
2
PDB entries
1

Binding sites

U9M in 2 structures; the first of them:

  • 1SR5 · Antithrombin-anhydrothrombin-heparin ternary complex structure · U9M D4 · binds LYS11, THR44, ASN45, ARG46, LYS125
  • 1SR5 · Antithrombin-anhydrothrombin-heparin ternary complex structure · U9M D4 · binds LYS11, THR44, ASN45, ARG46, LYS125

Residues it binds most

LYS 2, ARG 2, ASN 2, THR 2 (residue and the binding sites it lines).

Found with

  • GU4 · 2,3,4,6-tetra-O-sulfonato-alpha-D-glucopyranose
  • GU6 · 2,3,6-tri-O-sulfo-alpha-D-glucopyranose
  • GU8 · 2,3,6-tri-O-methyl-beta-D-glucopyranose
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • U9D · 4-deoxy-2,3,6-tri-O-methyl-alpha-D-xylo-hexopyranose
  • U9G · 2,3-di-O-methyl-6-O-sulfo-alpha-D-glucopyranose
  • U9J · (2R,3R,4S,5S,6R)-6-(dihydroxymethyl)-3,4-dimethoxytetrahydro-2H-pyran-2,5-diol
  • YYB · 1,5-anhydro-3-O-methyl-2,6-di-O-sulfo-D-glucitol

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.