Ligand · GU6
GU6 · 2,3,6-tri-O-sulfo-alpha-D-glucopyranose
GU6, 2,3,6-tri-O-sulfo-alpha-D-glucopyranose (C6 H12 O15 S3, 420.4 g/mol), in the MolNFT structures on GenesisL1: bound in 12 records (7 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the…
- Component
- GU6
- Formula
- C6 H12 O15 S3
- Class
- sugar
- Structures
- 12
- PDB entries
- 7
Binding sites
GU6 in 12 structures; the first of them:
- 1AZX · ANTITHROMBIN/PENTASACCHARIDE complex · GU6 A3 · binds LYS11, PRO12, ARG13, ASN45, ARG47, LYS114, PHE121, PHE122
- 1E03 · Plasma alpha antithrombin-III and pentasaccharide · GU6 E3 · binds LYS11, PRO12, ARG13, ASN45, ARG47, LYS114, PHE122
- 1NQ9 · Crystal Structure of Antithrombin in the Pentasaccharide-Bound Intermediate State · GU6 D3 · binds LYS11, PRO12, ARG13, ASN45, ARG47, LYS114, PHE122
- 1SR5 · Antithrombin-anhydrothrombin-heparin ternary complex structure · GU6 D3 · binds LYS11, PRO12, ARG13, ASN45, ARG47, LYS114, PHE121, PHE122
- 1TB6 · 2.5A Crystal Structure of the Antithrombin-Thrombin-Heparin Ternary Complex · GU6 B3 · binds LYS11, PRO12, ARG13, ASN45, ARG47, LYS114, PHE121, PHE122 and 1 more
- 3KCG · Crystal structure of the antithrombin-factor IXa-pentasaccharide complex · GU6 D3 · binds LYS11, PRO12, ARG13, ASN45, ARG47, LYS114, PHE121, PHE122 and 1 more
- 1AZX · ANTITHROMBIN/PENTASACCHARIDE complex · GU6 A3 · binds LYS11, PRO12, ARG13, ASN45, ARG47, LYS114, PHE121, PHE122
- 1E03 · Plasma alpha antithrombin-III and pentasaccharide · GU6 E3 · binds LYS11, PRO12, ARG13, ASN45, ARG47, LYS114, PHE122
- 1NQ9 · Crystal structure of antithrombin in the pentasaccharide-bound intermediate state · GU6 D3 · binds LYS11, PRO12, ARG13, ASN45, ARG47, LYS114, PHE122
- 1SR5 · Antithrombin-anhydrothrombin-heparin ternary complex structure · GU6 D3 · binds LYS11, PRO12, ARG13, ASN45, ARG47, LYS114, PHE121, PHE122
- 1TB6 · 2.5A crystal structure of the antithrombin-thrombin-heparin ternary complex · GU6 B3 · binds LYS11, PRO12, ARG13, ASN45, ARG47, LYS114, PHE121, PHE122 and 1 more
- 2B5T · 2.1 ångström structure of a nonproductive complex between antithrombin, synthetic heparin… · GU6 G3 · binds LYS11, PRO12, ARG13, ASN45, ARG47, LYS114, PHE121, PHE122
Residues it binds most
ARG 21, LYS 21, PHE 18, ASN 19, PRO 18, TRP 3, HIS 1, ASP 1, LEU 1 (residue and the binding sites it lines).
Found with
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
- GU1 · 2,3-di-O-methyl-beta-D-glucopyranuronic acid
- Z9K · 3-O-methyl-2-O-sulfo-alpha-L-idopyranuronic acid
- Z9L · methyl 2,3,6-tri-O-sulfo-alpha-D-glucopyranoside
- Z9H · 3,4-di-O-methyl-2,6-di-O-sulfo-alpha-D-glucopyranose
- GU4 · 2,3,4,6-tetra-O-sulfonato-alpha-D-glucopyranose
- BMA · beta-D-mannopyranose
- GU8 · 2,3,6-tri-O-methyl-beta-D-glucopyranose
- FUC · alpha-L-fucopyranose
- MAN · alpha-D-mannopyranose
- GU0 · 2,3,6-tri-O-sulfonato-beta-D-glucopyranose
- GU2 · 2,3-di-O-methyl-alpha-L-idopyranuronic acid
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