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Ligand · GU0

GU0 · 2,3,6-tri-O-sulfonato-beta-D-glucopyranose

GU0, 2,3,6-tri-O-sulfonato-beta-D-glucopyranose (C6 H9 O15 S3 -3, 417.3 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and…

Component
GU0
Formula
C6 H9 O15 S3 -3
Class
sugar
Structures
4
PDB entries
2

Binding sites

GU0 in 4 structures; the first of them:

  • 1TB6 · 2.5A Crystal Structure of the Antithrombin-Thrombin-Heparin Ternary Complex · GU0 B14 · binds PRO92, ARG93, TRP237
  • 2B5T · 2.1 Angstrom structure of a nonproductive complex between antithrombin, synthetic heparin… · GU0 G14 · binds PRO92, ARG93, LYS240, GLN244, ARG93, ARG101
  • 1TB6 · 2.5A crystal structure of the antithrombin-thrombin-heparin ternary complex · GU0 B14 · binds PRO92, ARG93, TRP237
  • 2B5T · 2.1 ångström structure of a nonproductive complex between antithrombin, synthetic heparin… · GU0 G14 · binds PRO92, ARG93, LYS240, GLN244, ARG93, ARG101

Residues it binds most

ARG 4, PRO 4, GLN 2, LYS 2, TRP 2 (residue and the binding sites it lines).

Found with

  • GU4 · 2,3,4,6-tetra-O-sulfonato-alpha-D-glucopyranose
  • BMA · beta-D-mannopyranose
  • FUC · alpha-L-fucopyranose
  • GU1 · 2,3-di-O-methyl-beta-D-glucopyranuronic acid
  • GU2 · 2,3-di-O-methyl-alpha-L-idopyranuronic acid
  • GU3 · methyl 3-O-methyl-2,6-di-O-sulfo-alpha-D-glucopyranoside
  • GU5 · 2,3-di-O-methyl-6-O-sulfonato-alpha-D-glucopyranose
  • GU6 · 2,3,6-tri-O-sulfo-alpha-D-glucopyranose
  • GU8 · 2,3,6-tri-O-methyl-beta-D-glucopyranose
  • GU9 · 2,3,6-tri-O-methyl-alpha-D-glucopyranose
  • MAN · alpha-D-mannopyranose
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose

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