Ligand · GU5
GU5 · 2,3-di-O-methyl-6-O-sulfonato-alpha-D-glucopyranose
GU5, 2,3-di-O-methyl-6-O-sulfonato-alpha-D-glucopyranose (C8 H15 O9 S -1, 287.3 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds…
- Component
- GU5
- Formula
- C8 H15 O9 S -1
- Class
- sugar
- Structures
- 4
- PDB entries
- 2
Binding sites
GU5 in 4 structures; the first of them:
- 1TB6 · 2.5A Crystal Structure of the Antithrombin-Thrombin-Heparin Ternary Complex · GU5 B5 · binds ALA43, THR44, ASN45, VAL48, LYS125, ARG129
- 2B5T · 2.1 Angstrom structure of a nonproductive complex between antithrombin, synthetic heparin… · GU5 G5 · binds ALA43, THR44, ASN45, VAL48, LYS125, ARG129
- 1TB6 · 2.5A crystal structure of the antithrombin-thrombin-heparin ternary complex · GU5 B5 · binds ALA43, THR44, ASN45, VAL48, LYS125, ARG129
- 2B5T · 2.1 ångström structure of a nonproductive complex between antithrombin, synthetic heparin… · GU5 G5 · binds ALA43, THR44, ASN45, VAL48, LYS125, ARG129
Residues it binds most
ARG 6, ALA 4, ASN 4, LYS 4, THR 4, VAL 4, PRO 2 (residue and the binding sites it lines).
Found with
- GU4 · 2,3,4,6-tetra-O-sulfonato-alpha-D-glucopyranose
- BMA · beta-D-mannopyranose
- FUC · alpha-L-fucopyranose
- GU0 · 2,3,6-tri-O-sulfonato-beta-D-glucopyranose
- GU1 · 2,3-di-O-methyl-beta-D-glucopyranuronic acid
- GU2 · 2,3-di-O-methyl-alpha-L-idopyranuronic acid
- GU3 · methyl 3-O-methyl-2,6-di-O-sulfo-alpha-D-glucopyranoside
- GU6 · 2,3,6-tri-O-sulfo-alpha-D-glucopyranose
- GU8 · 2,3,6-tri-O-methyl-beta-D-glucopyranose
- GU9 · 2,3,6-tri-O-methyl-alpha-D-glucopyranose
- MAN · alpha-D-mannopyranose
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
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