Ligand · GU8
GU8 · 2,3,6-tri-O-methyl-beta-D-glucopyranose
GU8, 2,3,6-tri-O-methyl-beta-D-glucopyranose (C9 H18 O6, 222.2 g/mol), in the MolNFT structures on GenesisL1: bound in 6 records (3 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…
- Component
- GU8
- Formula
- C9 H18 O6
- Class
- sugar
- Structures
- 6
- PDB entries
- 3
Binding sites
GU8 in 6 structures; the first of them:
- 1SR5 · Antithrombin-anhydrothrombin-heparin ternary complex structure · GU8 D6 · binds CYS8, ARG132
- 1TB6 · 2.5A Crystal Structure of the Antithrombin-Thrombin-Heparin Ternary Complex · GU8 B6 · binds ALA43
- 2B5T · 2.1 Angstrom structure of a nonproductive complex between antithrombin, synthetic heparin… · GU8 G6 · binds CYS8, THR9, LYS125
- 1SR5 · Antithrombin-anhydrothrombin-heparin ternary complex structure · GU8 D6 · binds CYS8, ARG132
- 1TB6 · 2.5A crystal structure of the antithrombin-thrombin-heparin ternary complex · GU8 B6 · binds ALA43
- 2B5T · 2.1 ångström structure of a nonproductive complex between antithrombin, synthetic heparin… · GU8 G6 · binds CYS8, THR9, LYS125
Residues it binds most
CYS 4, ALA 2, ARG 2, LYS 2, THR 2 (residue and the binding sites it lines).
Found with
- GU4 · 2,3,4,6-tetra-O-sulfonato-alpha-D-glucopyranose
- GU6 · 2,3,6-tri-O-sulfo-alpha-D-glucopyranose
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
- BMA · beta-D-mannopyranose
- FUC · alpha-L-fucopyranose
- GU0 · 2,3,6-tri-O-sulfonato-beta-D-glucopyranose
- GU1 · 2,3-di-O-methyl-beta-D-glucopyranuronic acid
- GU2 · 2,3-di-O-methyl-alpha-L-idopyranuronic acid
- GU3 · methyl 3-O-methyl-2,6-di-O-sulfo-alpha-D-glucopyranoside
- GU5 · 2,3-di-O-methyl-6-O-sulfonato-alpha-D-glucopyranose
- GU9 · 2,3,6-tri-O-methyl-alpha-D-glucopyranose
- MAN · alpha-D-mannopyranose
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