Ligand · RQ0
RQ0 · 2-azanyl-5-[(2~{E},6~{E},8~{E},10~{E},12~{E},14~{E}, 18~{E},22~{E},26~{E},30~{E},34~{E})-3,7,11,15,19,23, 27,31,35,39-decamethyltetraconta-2,6,8,10,12,14,18,22, 26,30,34,38-dodecaenyl]-3-methoxy-6-methyl-cyclohexa-2,5-diene-1,4-dione
RQ0, 2-azanyl-5-[(2~{E},6~{E},8~{E},10~{E},12~{E},14~{E}, 18~{E},22~{E},26~{E},30~{E},34~{E})-3,7,11,15,19,23, 27,31,35,39-decamethyltetraconta-2,6,8,10,12,14,18,22, 26,30,34,38-dodecaenyl]-3-methoxy-6-methyl-cyclohexa-2,5-diene-1,4-dione…
- Component
- RQ0
- Formula
- C58 H85 N O3
- Class
- ligand
- Structures
- 2
- PDB entries
- 2
Binding sites
RQ0 in 2 structures; the first of them:
- 7EQD · Structure of photosynthetic LH1-rc super-complex of rhodospirillum rubrum · RQ0 M406 · binds PHE30, LEU40, VAL44, ALA48, VAL51, TRP101, ARG104, LEU214 and 19 more
- 7OY8 · Cryo-EM structure of the rhodospirillum rubrum rc-LH1 complex · RQ0 L1002 · binds PRO172, MET175, LEU176, THR179, TRP244, LEU251, ILE255, TYR256 and 6 more
Residues it binds most
TRP 2, PHE 2, LEU 2, THR 2, ALA 1, ILE 2, MET 2, VAL 1, ARG 1, ASN 1 (residue and the binding sites it lines).
Found with
- 07D · Trans-geranyl bacteriochlorophyll A
- CRT · Spirilloxanthin
- U10 · Ubiquinone-10
- FE · Fe (III) ion
- LMT · Dodecyl-beta-D-maltoside
- 08I · Trans-geranyl bacteriopheophytin A
- BPH · Bacteriopheophytin A
- CD4 · (2R,5R,11R,14R)-5,8,11-trihydroxy-5,11-dioxido-17-oxo-2,14-bis(tetradecanoyloxy)-4,6,10,12,16-pentaoxa-5,11-diphosphatriacont-1-yl tetradecanoate
- CDL · Cardiolipin
- PEF · Di-palmitoyl-3-sn-phosphatidylethanolamine
- PGV · (1R)-2-{[{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy) phosphoryl]oxy}-1-[(palmitoyloxy)methyl]ethyl (11E)-octadec-11-enoate
- PGW · (1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy) phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate
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