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Ligand · LBN

LBN · 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine

LBN, 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (C42 H82 N O8 P, 760.1 g/mol), in the MolNFT structures on GenesisL1: bound in 45 records (39 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most…

Component
LBN
Formula
C42 H82 N O8 P
Class
ligand
Structures
45
PDB entries
39

Binding sites

LBN in 45 structures; the first of them:

  • 7F8J · Cryo-EM structure of human pannexin-1 in a nanodisc · LBN A501 · binds VAL11, LEU17, ALA33, VAL34, MET37, CYS40, ILE41, LEU45 and 10 more

Residues it binds most

LEU 274, PHE 274, TYR 219, ILE 192, VAL 182, SER 122, GLY 122, LYS 107, TRP 93, GLU 98 (residue and the binding sites it lines).

Found with

  • 6OU · [(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{Z})-octadec-9-enoate
  • CLR · Cholesterol
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • NA · Sodium ion
  • 6EU · resiniferatoxin
  • YFP · 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoglycerol
  • CA · Calcium ion
  • 4DY · (6E)-N-(4-hydroxy-3-methoxybenzyl)-8-methylnon-6-enamide
  • AV0 · 2-decyl-2-{[(4-O-alpha-D-glucopyranosyl-beta-D-glucopyranosyl)oxy]methyl}dodecyl 4-O-alpha-D-glucopyranosyl-beta-D-glucopyranoside
  • T7X · Phosphatidylinositol
  • Y01 · Cholesterol hemisuccinate
  • SO4 · Sulfate ion

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