Ligand · YFP
YFP · 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoglycerol
YFP, 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoglycerol (C40 H77 O10 P, 749.0 g/mol), in the MolNFT structures on GenesisL1: bound in 7 records (5 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most…
- Component
- YFP
- Formula
- C40 H77 O10 P
- Class
- ligand
- Structures
- 7
- PDB entries
- 5
Binding sites
YFP in 7 structures; the first of them:
- 7LPA · Cryo-EM structure of full-length TRPV1 with capsaicin at 4 degrees Celsius · YFP A908 · binds TYR435, PHE438, PHE559, GLN560, PHE582
- 7LPC · Cryo-EM structure of full-length TRPV1 at 48 degrees Celsius · YFP C903 · binds TYR435, PHE438, PHE439, CYS442, LEU443, GLY558, PHE559, GLN560 and 2 more
- 7LP9 · Cryo-EM structure of full-length TRPV1 at 4 degrees celsius · YFP B903 · binds PHE582, PHE559, GLN560, MET562
- 7LPA · Cryo-EM structure of full-length TRPV1 with capsaicin at 4 degrees celsius · YFP A908 · binds TYR435, PHE438, PHE559, GLN560, PHE582
- 7LPB · Cryo-EM structure of full-length TRPV1 with capsaicin at 25 degrees celsius · YFP A1600 · binds TYR435, PHE438, PHE439, PHE559, GLN560
- 7LPC · Cryo-EM structure of full-length TRPV1 at 48 degrees celsius · YFP C903 · binds TYR435, PHE438, PHE439, CYS442, LEU443, GLY558, PHE559, GLN560 and 2 more
- 7RQU · Cryo-EM structure of the full-length TRPV1 with rtx at 4 degrees celsius, in a closed… · YFP A909 · binds TYR435, PHE438, PHE559, MET562, PHE582
Residues it binds most
PHE 28, TYR 27, GLN 24, MET 15, CYS 8, GLY 8, LEU 8, THR 3 (residue and the binding sites it lines).
Found with
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