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Ligand · GZL

GZL · beta-D-galactofuranose

GZL, beta-D-galactofuranose (C6 H12 O6, 180.2 g/mol), in the MolNFT structures on GenesisL1: bound in 3 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
GZL
Formula
C6 H12 O6
Class
ligand
Structures
3
PDB entries
2

Binding sites

GZL in 3 structures; the first of them:

  • 5LSH · human lysozyme in complex with a tetrasaccharide fragment of the O-chain of LPS from… · GZL B3 · binds ASN60, ARG62, TYR63, TRP64, GLN104, ALA108
  • 5LSH · Human lysozyme in complex with a tetrasaccharide fragment of the O- chain of lps from… · GZL B3 · binds ASN60, ARG62, TYR63, TRP64, ALA108
  • 6HBD · Crystal structure of MSMEG_1712 from mycobacterium smegmatis in complex with… · GZL A410 · binds GLU28, SER29, TRP31, ARG32, ASP105, ARG106, PHE124, PRO159 and 5 more

Residues it binds most

ARG 4, ASN 4, ASP 2, TRP 4, PHE 2, ALA 2, CYS 2, GLU 2, PRO 2, SER 2 (residue and the binding sites it lines).

Found with

  • TVG · propyl beta-D-galactofuranoside
  • NA · Sodium ion
  • GLA · alpha-D-galactopyranose
  • CL · Chloride ion
  • ZN · Zinc ion

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