Ligand · APN
APN · 2-aminoethylglycine-carbonylmethylene-adenine
APN, 2-aminoethylglycine-carbonylmethylene-adenine (C11 H16 N7 O3 +1, 294.3 g/mol), in the MolNFT structures on GenesisL1: bound in 6 records (6 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most…
- Component
- APN
- Formula
- C11 H16 N7 O3 +1
- Class
- ligand
- Structures
- 6
- PDB entries
- 6
Binding sites
APN in 6 structures; the first of them:
- 176D · NMR solution structure of a peptide nucleic acid complexed with RNA · APN A2 · binds U11, C12
- 1HZS · Crystal structure of a peptide nucleic acid duplex (bt-pna) containing a bicyclic… · APN A3
- 1NR8 · The crystal structure of a D-lysine-based chiral pna-DNA duplex · APN B3 · binds DT8, DA9
- 1PDT · PD235, pna-DNA duplex, NMR, 8 structures · APN B12 · binds DT5, DA6
- 1QPY · Crystal structure of backbone modified pna hexamer · APN A4
- 1RRU · The influence of a chiral amino acid on the helical handedness of pna in solution and in… · APN A4
Residues it binds most
DT 3, U 2, DA 2, DG 1, C 1, G 1, LYS 1 (residue and the binding sites it lines).
Found with
- GPN · 2-aminoethylglycine-carbonylmethylene-guanine
- CPN · 2-aminoethylglycine-carbonylmethylene-cytosine
- TPN · 2-aminoethylglycine-carbonylmethylene-thymine
- NH2 · Amino group
- A66 · 2-aminoethyllysine-carbonylmethylene-adenine
- C66 · 2-aminoethyllysine-carbonylmethylene-cytosine
- CP1 · 2-(methylamino)-ethylglycine-carbonylmethylene-cytosine
- OPN · {(2-amino-ethyl)-[2-(2-oxo-1,2-dihydro-[1, 8]naphthyridin-3-yl)-acetyl]-amino}-acetic acid
- T66 · 2-aminoethyllysine-carbonylmethylene-thymine
- TP1 · 2-(methylamino)-ethylglycine-carbonylmethylene-thymine
- MG · Magnesium ion
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