MolNFT v2 · #210757 · protein
Cryo-EM Structure of the Prostaglandin E2 Receptor 4 Coupled to G Protein
8GDB: “Cryo-EM Structure of the Prostaglandin E2 Receptor 4 Coupled to G Protein”. Electron microscopy at 3.1, 1 ligand (P2E). MolNFT v2 #210757 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 8GDB
- Type
- protein
- Length
- 1,037 residues
- Chains
- 5
- Method
- electron microscopy
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 3.1
- Source
- Homo sapiens; Lama glama
- UniProt
- P63092, P62873, A0A7J7XNR4, P35408
- Ligands
- P2E
Structure
electron microscopy · resolution 3.1 · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 231 | — | P63092 |
| B | — | protein | 339 | — | P62873 |
| G | — | protein | 58 | — | A0A7J7XNR4 |
| N | — | protein | 126 | — | — |
| R | — | protein | 283 | — | P35408 |
Ligands and binding sites
- P2E · (Z)-7-[(1R,2R,3R)-3-hydroxy-2-[(E,3S)-3-hydroxyoct-1-enyl]-5-oxo-cyclopentyl]hept-5-enoic acid · ligand · chains R
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- P62873 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I)/G(S)/G(T)… · a predicted model of the same protein · chain B against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P63092
- Every structure of UniProt P62873
- Every structure of UniProt A0A7J7XNR4
- Every structure of UniProt P35408
- Elsewhere: RCSB PDB 8GDB · PDBe 8GDB · UniProt P63092 · UniProt P62873 · UniProt A0A7J7XNR4 · UniProt P35408
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