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MolNFT v2 · #158898 · protein

Cryo-EM structure of parathyroid hormone receptor type 1 in complex with a long-acting parathyroid hormone analog and G protein

6NBF: “Cryo-EM structure of parathyroid hormone receptor type 1 in complex with a long-acting parathyroid hormone…”. Electron microscopy at 3.0, 2 ligands (CLR, PLM). MolNFT v2 #158898 on GenesisL1: 3D structure, binding sites and pockets…

PDB
6NBF
Type
protein
Length
1,148 residues
Chains
6
Method
electron microscopy
Collection
MolNFT v2 / PDB Bank
Contract
0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner
0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution
3.0
Source
Bos taurus; Homo sapiens; Rattus norvegicus; synthetic construct; SYNTHETIC…
UniProt
Q03431, P54311, P63212
Ligands
CLR, PLM

Structure

electron microscopy · resolution 3.0 · 6 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
R—protein368—Q03431
P—protein32——
A—protein227——
B—protein338—P54311
G—protein57—P63212
N—protein126——

Ligands and binding sites

  • CLR · Cholesterol · ligand · 6 copies · chains R
  • PLM · Palmitic acid · ligand · 4 copies · chains R

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6NBF · Cryo-EM structure of parathyroid hormone receptor type 1 in complex with a long-acting… · the same entry in another collection · chain R against R, TM-score 1.00
  • P54311 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I)/G(S)/G(T)… · a predicted model of the same protein · chain B against A, TM-score 1.00
  • Q03431 · AlphaFold monomer V2.0 prediction for parathyroid HORMONE/PARATHYROID hormone-related… · a predicted model of the same protein · chain R against A, TM-score 0.96
  • P63212 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I)/G(S)/G(O)… · a predicted model of the same protein · chain G against A, TM-score 0.67

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