MolNFT v2 · #145888 · protein
Electron cryo-microscopy of the eukaryotic translation initiation factor 2B from Homo sapiens
6CAJ: “Electron cryo-microscopy of the eukaryotic translation initiation factor 2B from Homo sapiens”. Electron microscopy at 2.8, 1 ligand (C7B). MolNFT v2 #145888 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6CAJ
- Type
- protein
- Length
- 3,210 residues
- Chains
- 10
- Method
- electron microscopy
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.8
- Source
- Homo sapiens
- UniProt
- Q13144, Q9NR50, Q14232, P49770, Q9UI10
- Ligands
- C7B
Structure
electron microscopy · resolution 2.8 · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B, A | — | protein | 421 | — | Q13144 |
| J, I | — | protein | 244 | — | Q9NR50 |
| H, G | — | protein | 265 | — | Q14232 |
| C, D | — | protein | 318 | — | P49770 |
| F, E | — | protein | 357 | — | Q9UI10 |
Ligands and binding sites
- C7B · 2-(4-chloranylphenoxy)-~{N}-[4-[2-(4-chloranylphenoxy) ethanoylamino]cyclohexyl]ethanamide · ligand · chains C, F, D, E
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6CAJ · Electron cryo-microscopy of the eukaryotic translation initiation factor 2B from homo… · the same entry in another collection · chain J against J, TM-score 1.00
- Q9UI10 · AlphaFold monomer V2.0 prediction for translation initiation factor eif-2B subunit delta… · a predicted model of the same protein · chain F against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q13144
- Every structure of UniProt Q9NR50
- Every structure of UniProt Q14232
- Every structure of UniProt P49770
- Every structure of UniProt Q9UI10
- Elsewhere: RCSB PDB 6CAJ · PDBe 6CAJ · UniProt Q13144 · UniProt Q9NR50 · UniProt Q14232 · UniProt P49770 · UniProt Q9UI10
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