GL1X · GenesisL1 explorer

MolNFT v2 · #119881 · protein

Cryo-EM structure of yeast cytoplasmic exosome

5G06: “Cryo-EM structure of yeast cytoplasmic exosome”. Electron microscopy at 4.2. MolNFT v2 #119881 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
5G06
Type
protein
Length
3,420 residues
Chains
11
Method
electron microscopy
Collection
MolNFT v2 / PDB Bank
Contract
0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner
0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution
4.2
Source
SACCHAROMYCES CEREVISIAE
UniProt
Q05636, P46948, P25359, P53256, Q12277, P48240, Q08285, P38792, P53859, Q08162, Q08491

Structure

electron microscopy · resolution 4.2 · 11 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein302—Q05636
B—protein240—P46948
C—protein335—P25359
D—protein223—P53256
E—protein265—Q12277
F—protein211—P48240
G—protein236—Q08285
H—protein293—P38792
I—protein227—P53859
J—protein993—Q08162
P—protein95—Q08491

Compared structures

  • 5G06 · Cryo-EM structure of yeast cytoplasmic exosome · the same entry in another collection · chain P against P, TM-score 1.00
  • P46948 · AlphaFold monomer V2.0 prediction for exosome complex component SKI6 (P46948) · a predicted model of the same protein · chain B against A, TM-score 0.97

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