UniProt P46948
Exosome complex component SKI6 (P46948)
Exosome complex component SKI6 (UniProt P46948): 16 experimental structures and 1 predicted model on GenesisL1, 3 ligands bound, 2 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P46948
- Protein
- Exosome complex component SKI6
- Experimental structures
- 16
- Predicted models
- 1
- Ligands
- 3
- Pockets
- 2 · 0 records with a druggable one
Structures
17 records of P46948 in the MolNFT archive: 16 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 2WP8 | yeast rrp44 nuclease | x-ray diffraction | B | — | — |
| 2WP8 | Yeast RRP44 nuclease | x-ray diffraction | B | — | — |
| 4IFD | Crystal structure of an 11-subunit eukaryotic exosome complex bound to RNA | x-ray diffraction | B | — | — |
| 4IFD | Crystal structure of an 11-subunit eukaryotic exosome complex bound to RNA | x-ray diffraction | B | — | — |
| 4OO1 | Structure of an Rrp6-RNA exosome complex bound to poly(A) RNA | x-ray diffraction | B | — | — |
| 4OO1 | Structure of an RRP6-RNA exosome complex bound to POLY(A) RNA | x-ray diffraction | B | — | — |
| 5C0W | Structure of a 12-subunit nuclear exosome complex bound to single- stranded RNA substrates | x-ray diffraction | B | — | — |
| 5C0X | Structure of a 12-subunit nuclear exosome complex bound to structured RNA | x-ray diffraction | B | — | — |
| 5G06 | Cryo-EM structure of yeast cytoplasmic exosome | electron microscopy | B | — | — |
| 5G06 | Cryo-EM structure of yeast cytoplasmic exosome | electron microscopy | B | — | — |
| 5JEA | Structure of a cytoplasmic 11-subunit RNA exosome complex including SKI7, bound to RNA | x-ray diffraction | B | — | — |
| 5K36 | Structure of an eleven component nuclear RNA exosome complex bound to RNA | x-ray diffraction | B | SO4 | — |
| 5K36 | Structure of an eleven component nuclear RNA exosome complex bound to RNA | x-ray diffraction | B | SO4 | — |
| 5OKZ | Crystal strucrure of the MPP6 exosome complex | x-ray diffraction | B, L, V, f | TAM, CL | — |
| 5VZJ | Structure of a twelve component MPP6-nuclear RNA exosome complex bound to RNA | x-ray diffraction | B | SO4 | — |
| 6LQS | Cryo-EM structure of 90S small subunit preribosomes in transition states (State D) | electron microscopy | R1 | — | — |
| P46948 | AlphaFold monomer V2.0 prediction for exosome complex component SKI6 (P46948) | predicted | A | — | 2 (best 0.43) |
Ligands
Experiment against prediction
- 2WP8 chain B against the predicted model P46948: TM-score 0.99, RMSD 0.67 Å
- 2WP8 chain B against the predicted model P46948: TM-score 0.99, RMSD 0.67 Å
- 5OKZ chain V against the predicted model P46948: TM-score 0.98, RMSD 1.01 Å
- 5OKZ chain B against the predicted model P46948: TM-score 0.98, RMSD 0.99 Å
- 5OKZ chain L against the predicted model P46948: TM-score 0.98, RMSD 0.96 Å
- 5OKZ chain f against the predicted model P46948: TM-score 0.98, RMSD 1.07 Å
- 5K36 chain B against the predicted model P46948: TM-score 0.98, RMSD 1.14 Å
- 5K36 chain B against the predicted model P46948: TM-score 0.98, RMSD 1.14 Å
- 5JEA chain B against the predicted model P46948: TM-score 0.98, RMSD 1.19 Å
- 4OO1 chain B against the predicted model P46948: TM-score 0.98, RMSD 1.17 Å
Elsewhere
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.