MolNFT v1 · #190130 · protein
Cryo-EM structure of the L-054,264-bound human SSTR2-GI1 complex
7WIG: “Cryo-EM structure of the L-054,264-bound human SSTR2-GI1 complex”. Electron microscopy, 1 ligand (9FI). MolNFT v1 #190130 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7WIG
- Type
- protein
- Length
- 1,139 residues
- Chains
- 5
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P30874, P63096, P54311, P63212
- Ligands
- 9FI
Structure
electron microscopy · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| R | — | protein | 283 | — | P30874 |
| A | — | protein | 225 | — | P63096 |
| B | — | protein | 339 | — | P54311 |
| G | — | protein | 58 | — | P63212 |
| S | — | protein | 234 | — | — |
Ligands and binding sites
- 9FI · ~{N}-[(2~{R})-1-[[(1~{R},3~{S})-3-(aminomethyl) cyclohexyl]methylamino]-3-(1~{H}-indol-3-yl)-1-oxidanylidene-propan-2-yl]spiro[indene-1,4'-piperidine]-1'-carboxamide · ligand · chains R
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7WIG · Cryo-EM structure of the L-054,264-bound human SSTR2-Gi1 complex · the same entry in another collection · chain S against S, TM-score 1.00
- P54311 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I)/G(S)/G(T)… · a predicted model of the same protein · chain B against A, TM-score 0.99
- P30874 · AlphaFold monomer V2.0 prediction for somatostatin receptor type 2 (P30874) · a predicted model of the same protein · chain R against A, TM-score 0.90
- P63096 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I) subunit… · a predicted model of the same protein · chain A against A, TM-score 0.83
- P63212 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I)/G(S)/G(O)… · a predicted model of the same protein · chain G against A, TM-score 0.66
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P30874
- Every structure of UniProt P63096
- Every structure of UniProt P54311
- Every structure of UniProt P63212
- Elsewhere: RCSB PDB 7WIG · PDBe 7WIG · UniProt P30874 · UniProt P63096 · UniProt P54311 · UniProt P63212
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