MolNFT v1 · #188909 · protein
Cryoem structure of go-coupled 5-HT5AR in complex with methylergometrine
7UM7: “Cryoem structure of go-coupled 5-HT5AR in complex with methylergometrine”. Electron microscopy, 1 ligand (H8D). MolNFT v1 #188909 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7UM7
- Type
- protein
- Length
- 1,089 residues
- Chains
- 5
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P47898, P62873, P59768
- Ligands
- H8D
Structure
electron microscopy · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 256 | — | P47898 |
| B | — | protein | 214 | — | — |
| C | — | protein | 338 | — | P62873 |
| D | — | protein | 51 | — | P59768 |
| E | — | protein | 230 | — | — |
Ligands and binding sites
- H8D · (8beta)-N-[(2S)-1-hydroxybutan-2-yl]-6-methyl-9,10-didehydroergoline-8-carboxamide · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7UM7 · CryoEM structure of Go-coupled 5-HT5AR in complex with Methylergometrine · the same entry in another collection · chain E against E, TM-score 1.00
- P62873 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I)/G(S)/G(T)… · a predicted model of the same protein · chain C against A, TM-score 0.99
- P47898 · AlphaFold monomer V2.0 prediction for 5-hydroxytryptamine receptor 5A (P47898) · a predicted model of the same protein · chain A against A, TM-score 0.94
- P59768 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I)/G(S)/G(O)… · a predicted model of the same protein · chain D against A, TM-score 0.85
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P47898
- Every structure of UniProt P62873
- Every structure of UniProt P59768
- Elsewhere: RCSB PDB 7UM7 · PDBe 7UM7 · UniProt P47898 · UniProt P62873 · UniProt P59768
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