MolNFT v1 · #185154 · protein

Hhp-C in complex with glycosaminoglycan mimic sos

7PGN: “Hhp-C in complex with glycosaminoglycan mimic sos”. X-ray diffraction, 3 ligands (GU4, YYJ, CA). MolNFT v1 #185154 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 7PGN
Type: protein
Length: 875 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: Q96QV1
Ligands: GU4, YYJ, CA

Structure

x-ray diffraction · 2 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	437	—	Q96QV1
B	—	protein	438	—	Q96QV1

Ligands and binding sites

GU4 · 2,3,4,6-tetra-O-sulfonato-alpha-D-glucopyranose · ligand · 4 copies · chains A, B
YYJ · 1,3,4,6-tetra-O-sulfo-beta-D-fructofuranose · ligand · 4 copies · chains A, B
CA · Calcium ion · metal · 2 copies · chains A, B
GOL · Glycerol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

7PGN · HHP-C in complex with glycosaminoglycan mimic SOS · the same entry in another collection · chain A against A, TM-score 1.00
Q96QV1 · AlphaFold monomer V2.0 prediction for hedgehog-interacting protein (Q96QV1) · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q96QV1
Elsewhere: RCSB PDB 7PGN · PDBe 7PGN · UniProt Q96QV1

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