MolNFT v1 · #178539 · protein
Cryo-EM structure of a membrane PROTEIN(CS)
7FJF: “Cryo-EM structure of a membrane PROTEIN(CS)”. Electron microscopy, 1 ligand (C3S). MolNFT v1 #178539 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7FJF
- Type
- protein
- Length
- 1,058 residues
- Chains
- 8
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P20963, P04234, P07766, P09693, A0A0B4J271, A0N4Z6, P01848, A0A0K0K1A5, P0DSE2, A0A0G2JMB4
- Ligands
- C3S
Structure
electron microscopy · 8 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| b | — | protein | 29 | — | P20963 |
| d | — | protein | 107 | — | P04234 |
| e | — | protein | 123 | — | P07766 |
| f | — | protein | 120 | — | P07766 |
| g | — | protein | 113 | — | P09693 |
| m | — | protein | 246 | — | A0A0B4J271, A0N4Z6, P01848 |
| n | — | protein | 287 | — | A0A0K0K1A5, P0DSE2, A0A0G2JMB4 |
| a | — | protein | 33 | — | P20963 |
Ligands and binding sites
- C3S · Cholest-5-en-3-yl hydrogen sulfate · ligand · 2 copies · chains b, g, m, n
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7FJF · Cryo-EM structure of a membrane protein(CS) · the same entry in another collection · chain a against a, TM-score 1.00
- P0DSE2 · AlphaFold monomer V2.0 prediction for M1-specific T cell receptor beta chain (P0DSE2) · a predicted model of the same protein · chain n against A, TM-score 0.93
- P07766 · AlphaFold monomer V2.0 prediction for T-cell surface glycoprotein CD3 epsilon chain… · a predicted model of the same protein · chain f against A, TM-score 0.85
- P20963 · P20963 · a predicted model of the same protein · chain b against A, TM-score 0.78
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P20963
- Every structure of UniProt P04234
- Every structure of UniProt P07766
- Every structure of UniProt P09693
- Every structure of UniProt A0A0B4J271
- Every structure of UniProt A0N4Z6
- Every structure of UniProt P01848
- Every structure of UniProt A0A0K0K1A5
- Every structure of UniProt P0DSE2
- Every structure of UniProt A0A0G2JMB4
- Elsewhere: RCSB PDB 7FJF · PDBe 7FJF · UniProt P20963 · UniProt P04234 · UniProt P07766 · UniProt P09693 · UniProt A0A0B4J271 · UniProt A0N4Z6 · UniProt P01848 · UniProt A0A0K0K1A5 · UniProt P0DSE2 · UniProt A0A0G2JMB4
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