MolNFT v1 · #472404 · protein
AlphaFold monomer V2.0 prediction for M1-specific T cell receptor beta chain (P0DSE2)
P0DSE2: “AlphaFold monomer V2.0 prediction for M1-specific T cell receptor beta chain (P0DSE2)”. 1 pocket (best druggability 0.43). MolNFT v1 #472404 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P0DSE2
- Type
- protein
- Length
- 310 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0D671490EE06E75975e90D7F99F73B20BE618744
- Molecule
- M1-specific T cell receptor beta chain
- UniProt
- P0DSE2
- Pockets
- 1 · best druggability 0.43
Structure
1 distinct chain · 18% helix, 39% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | M1-specific T cell receptor beta chain | protein | 310 | 18% helix, 39% strand | P0DSE2 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 168 | 0.43 | 0.74 | 28 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
- 6JXR · Structure of human T cell receptor-CD3 complex · an experimental structure of the same protein · chain A against n, TM-score 0.89
- 6JXR · Structure of human T cell receptor-CD3 complex · an experimental structure of the same protein · chain A against n, TM-score 0.89
- 7FJD · Cryo-EM structure of a membrane protein(WT) · an experimental structure of the same protein · chain A against n, TM-score 0.87
- 7FJD · Cryo-EM structure of a membrane PROTEIN(WT) · an experimental structure of the same protein · chain A against n, TM-score 0.87
- 7FJE · Cryo-EM structure of a membrane protein(LL) · an experimental structure of the same protein · chain A against n, TM-score 0.86
- 7FJE · Cryo-EM structure of a membrane PROTEIN(LL) · an experimental structure of the same protein · chain A against n, TM-score 0.86
- 7FJF · Cryo-EM structure of a membrane protein(CS) · an experimental structure of the same protein · chain A against n, TM-score 0.86
- 7FJF · Cryo-EM structure of a membrane PROTEIN(CS) · an experimental structure of the same protein · chain A against n, TM-score 0.86
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0DSE2
- Elsewhere: UniProt P0DSE2 · AlphaFold DB P0DSE2
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