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MolNFT v1 · #176273 · protein

Dog BETA3 adrenergic receptor bound to mirabegron in complex with a minigs heterotrimer

7DH5: “Dog BETA3 adrenergic receptor bound to mirabegron in complex with a minigs heterotrimer”. Electron microscopy, 1 ligand (H6U). MolNFT v1 #176273 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
7DH5
Type
protein
Length
1,027 residues
Chains
5
Method
electron microscopy
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P63092, P54311, P63212, O02662
Ligands
H6U

Structure

electron microscopy · 5 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein231—P63092
B—protein340—P54311
G—protein52—P63212
N—protein128——
R—protein276—O02662

Ligands and binding sites

  • H6U · 2-(2-azanyl-1,3-thiazol-4-yl)-N-[4-[2-[[(2R)-2-oxidanyl-2-phenyl-ethyl]amino]ethyl]phenyl]ethanamide · ligand · chains R

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7DH5 · Dog beta3 adrenergic receptor bound to mirabegron in complex with a miniGs heterotrimer · the same entry in another collection · chain R against R, TM-score 1.00
  • P54311 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I)/G(S)/G(T)… · a predicted model of the same protein · chain B against A, TM-score 0.99
  • O02662 · AlphaFold monomer V2.0 prediction for beta-3 adrenergic receptor (O02662) · a predicted model of the same protein · chain R against A, TM-score 0.91
  • P63212 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I)/G(S)/G(O)… · a predicted model of the same protein · chain G against A, TM-score 0.65

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