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MolNFT v1 · #174656 · protein

Glp-1R-gs complex structure with a small molecule full agonist

7C2E: “Glp-1R-gs complex structure with a small molecule full agonist”. Electron microscopy, 1 ligand (FFR). MolNFT v1 #174656 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
7C2E
Type
protein
Length
1,094 residues
Chains
5
Method
electron microscopy
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P62873, P59768, P43220
Ligands
FFR

Structure

electron microscopy · 5 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein193——
B—protein338—P62873
G—protein57—P59768
N—protein126——
R—protein380—P43220

Ligands and binding sites

  • FFR · 2-[[4-[6-[(4-cyano-2-fluoranyl-phenyl)methoxy]pyridin-2-yl]-3,6-dihydro-2~{H}-pyridin-1-yl]methyl]-3-[[(2~{S})-oxetan-2-yl]methyl]imidazo[4,5-b]pyridine-5-carboxylic acid · ligand · chains R

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7C2E · GLP-1R-Gs complex structure with a small molecule full agonist · the same entry in another collection · chain R against R, TM-score 1.00
  • P62873 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I)/G(S)/G(T)… · a predicted model of the same protein · chain B against A, TM-score 0.98
  • P59768 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I)/G(S)/G(O)… · a predicted model of the same protein · chain G against A, TM-score 0.90
  • P43220 · AlphaFold monomer V2.0 prediction for glucagon-like peptide 1 receptor (P43220) · a predicted model of the same protein · chain R against A, TM-score 0.81

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