MolNFT v1 · #169674 · protein

Crystal structure of kpt-8602 bound to CRM1 (E582K, 537-dltvk-541 to glceq)

6XJU: “Crystal structure of kpt-8602 bound to CRM1 (E582K, 537-dltvk-541 to glceq)”. X-ray diffraction, 3 ligands (GNP, 6L8, MG). MolNFT v1 #169674 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6XJU
Type: protein
Length: 1,342 residues
Chains: 3
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P62826, P41920, P30822
Ligands: GNP, 6L8, MG

Structure

x-ray diffraction · 3 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	208	—	P62826
B	—	protein	123	—	P41920
C	—	protein	1011	—	P30822

Ligands and binding sites

GNP · Phosphoaminophosphonic acid-guanylate ester · ligand · chains A
6L8 · (2R)-3-{3-[3,5-bis(trifluoromethyl)phenyl]-1H-1,2,4-triazol-1-yl}-2-(pyrimidin-5-yl)propanamide · ligand · chains C
MG · Magnesium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6XJU · Crystal Structure of KPT-8602 bound to CRM1 (E582K, 537-DLTVK-541 to GLCEQ) · the same entry in another collection · chain A against A, TM-score 1.00
P41920 · AlphaFold monomer V2.0 prediction for ran-specific GTPase-activating protein 1 (P41920) · a predicted model of the same protein · chain B against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P62826
Every structure of UniProt P41920
Every structure of UniProt P30822
Elsewhere: RCSB PDB 6XJU · PDBe 6XJU · UniProt P62826 · UniProt P41920 · UniProt P30822

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