MolNFT v1 · #163313 · protein
Cryo-EM structure of mouse cytoplasmic dynein-1 microtubule binding domain bound to microtubules
6RZB: “Cryo-EM structure of mouse cytoplasmic dynein-1 microtubule binding domain bound to microtubules”. Electron microscopy, 4 ligands (GTP, GDP, TA1). MolNFT v1 #163313 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6RZB
- Type
- protein
- Length
- 1,001 residues
- Chains
- 3
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q2XVP4, P02554, Q80U36
- Ligands
- GTP, GDP, TA1, MG
Structure
electron microscopy · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 426 | — | Q2XVP4 |
| B | — | protein | 426 | — | P02554 |
| C | — | protein | 149 | — | Q80U36 |
Ligands and binding sites
- GTP · Guanosine-5'-triphosphate · ligand · chains A, B
- GDP · Guanosine-5'-diphosphate · ligand · chains B
- TA1 · Taxol · ligand · chains B
- MG · Magnesium ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6RZB · Cryo-EM structure of mouse cytoplasmic dynein-1 microtubule binding domain bound to… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q2XVP4
- Every structure of UniProt P02554
- Every structure of UniProt Q80U36
- Elsewhere: RCSB PDB 6RZB · PDBe 6RZB · UniProt Q2XVP4 · UniProt P02554 · UniProt Q80U36
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