MolNFT v1 · #144099 · protein
TPX2_MINI decorated gmpcpp-microtubule
6BJC: “TPX2_MINI decorated gmpcpp-microtubule”. Electron microscopy, 3 ligands (GTP, G2P, MG). MolNFT v1 #144099 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6BJC
- Type
- protein
- Length
- 5,204 residues
- Chains
- 14
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q2XVP4, P02554, Q9ULW0
- Ligands
- GTP, G2P, MG
Structure
electron microscopy · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C, E, J, L, K | — | protein | 430 | — | Q2XVP4 |
| B, D, F, H, G, I | — | protein | 427 | — | P02554 |
| T, P | — | protein | 31 | — | Q9ULW0 |
Ligands and binding sites
- GTP · Guanosine-5'-triphosphate · ligand · 6 copies · chains A, H, C, I, E, G, F, J, D, L, B, K
- G2P · Phosphomethylphosphonic acid guanylate ester · ligand · 6 copies · chains B, D, F, H, G, I
- MG · Magnesium ion · metal · 12 copies · chains A, B, C, D, F, H, L, G, K, I
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6BJC · TPX2_mini decorated GMPCPP-microtubule · the same entry in another collection · chain P against P, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q2XVP4
- Every structure of UniProt P02554
- Every structure of UniProt Q9ULW0
- Elsewhere: RCSB PDB 6BJC · PDBe 6BJC · UniProt Q2XVP4 · UniProt P02554 · UniProt Q9ULW0
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