Research workbench
RNA polymerase II initial transcribing complex with a 6NT DNA-RNA hybrid and soaked with ampcpp
Analyse RNA polymerase II initial transcribing complex with a 6NT DNA-RNA hybrid and… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4A3F
- Type
- protein + DNA + RNA
- Length
- 3,967 residues
- Chains
- 15
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P04050, P08518, P16370, P20433, P20434, P20435, P34087, P20436, P27999, P22139, P38902, P40422
Structure
x-ray diffraction · 15 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 1425 | — | P04050 |
| B | — | protein | 1115 | — | P08518 |
| C | — | protein | 266 | — | P16370 |
| D | — | protein | 178 | — | P20433 |
| E | — | protein | 214 | — | P20434 |
| F | — | protein | 84 | — | P20435 |
| G | — | protein | 171 | — | P34087 |
| H | — | protein | 133 | — | P20436 |
| I | — | protein | 119 | — | P27999 |
| J | — | protein | 65 | — | P22139 |
| K | — | protein | 114 | — | P38902 |
| L | — | protein | 46 | — | P40422 |
| N | — | dna | 11 | — | — |
| P | — | rna | 6 | — | — |
| T | — | dna | 20 | — | — |
Compared structures
- 4A3F · RNA Polymerase II initial transcribing complex with a 6nt DNA-RNA hybrid and soaked with… · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P04050
- Every structure of UniProt P08518
- Every structure of UniProt P16370
- Every structure of UniProt P20433
- Every structure of UniProt P20434
- Every structure of UniProt P20435
- Every structure of UniProt P34087
- Every structure of UniProt P20436
- Every structure of UniProt P27999
- Every structure of UniProt P22139
- Every structure of UniProt P38902
- Every structure of UniProt P40422
- Elsewhere: RCSB PDB 4A3F · PDBe 4A3F · UniProt P04050 · UniProt P08518 · UniProt P16370 · UniProt P20433 · UniProt P20434 · UniProt P20435 · UniProt P34087 · UniProt P20436 · UniProt P27999 · UniProt P22139 · UniProt P38902 · UniProt P40422
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