Research workbench
Structure of the UBP8-SGF11-SGF73-SUS1 saga dub module
Analyse Structure of the UBP8-SGF11-SGF73-SUS1 saga dub module in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3M99
- Type
- protein
- Length
- 686 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P50102, Q03067, Q6WNK7, P53165
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 422 | — | P50102 |
| B | — | protein | 89 | — | Q03067 |
| C | — | protein | 91 | — | Q6WNK7 |
| D | — | protein | 84 | — | P53165 |
Compared structures
- 3M99 · Structure of the Ubp8-Sgf11-Sgf73-Sus1 SAGA DUB module · the same entry in another collection · chain D against D, TM-score 1.00
- P50102 · AlphaFold monomer V2.0 prediction for ubiquitin carboxyl-terminal hydrolase 8 (P50102) · a predicted model of the same protein · chain A against A, TM-score 0.98
- Q6WNK7 · AlphaFold monomer V2.0 prediction for transcription and mRNA export factor SUS1 (Q6WNK7) · a predicted model of the same protein · chain C against A, TM-score 0.91
- P53165 · AlphaFold monomer V2.0 prediction for saga-associated factor 73 (P53165) · a predicted model of the same protein · chain D against A, TM-score 0.90
- Q03067 · AlphaFold monomer V2.0 prediction for saga-associated factor 11 (Q03067) · a predicted model of the same protein · chain B against A, TM-score 0.69
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P50102
- Every structure of UniProt Q03067
- Every structure of UniProt Q6WNK7
- Every structure of UniProt P53165
- Elsewhere: RCSB PDB 3M99 · PDBe 3M99 · UniProt P50102 · UniProt Q03067 · UniProt Q6WNK7 · UniProt P53165
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