Research workbench
Human sumo E1~SUMO1-AMP tetrahedral intermediate mimic
Analyse Human sumo E1~SUMO1-AMP tetrahedral intermediate mimic in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 3KYD
- Type
- protein
- Length
- 855 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q9UBE0, Q9UBT2, P63165
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 301 | — | Q9UBE0 |
| B | — | protein | 477 | — | Q9UBT2 |
| D | — | protein | 77 | — | P63165 |
Compared structures
- 3KYD · Human SUMO E1~SUMO1-AMP tetrahedral intermediate mimic · the same entry in another collection · chain A against A, TM-score 1.00
- Q9UBE0 · AlphaFold monomer V2.0 prediction for sumo-activating enzyme subunit 1 (Q9UBE0) · a predicted model of the same protein · chain A against A, TM-score 0.98
- P63165 · AlphaFold monomer V2.0 prediction for small ubiquitin-related modifier 1 (P63165) · a predicted model of the same protein · chain D against A, TM-score 0.93
- Q9UBT2 · AlphaFold monomer V2.0 prediction for sumo-activating enzyme subunit 2 (Q9UBT2) · a predicted model of the same protein · chain B against A, TM-score 0.75
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9UBE0
- Every structure of UniProt Q9UBT2
- Every structure of UniProt P63165
- Elsewhere: RCSB PDB 3KYD · PDBe 3KYD · UniProt Q9UBE0 · UniProt Q9UBT2 · UniProt P63165
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