Research workbench
Cryo-EM structure of the adhesion GPCR ADGRF1 in complex with minigs
Analyse Cryo-EM structure of the adhesion GPCR ADGRF1 in complex with minigs in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7WU3
- Type
- protein
- Length
- 1,013 residues
- Chains
- 5
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P62873, P59768, Q5T601
- Ligands
- K6G
Structure
electron microscopy · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 211 | — | — |
| B | — | protein | 339 | — | P62873 |
| C | — | protein | 56 | — | P59768 |
| N | — | protein | 127 | — | — |
| R | — | protein | 280 | — | Q5T601 |
Ligands and binding sites
- K6G · [(2~{R})-2-oxidanyl-3-[oxidanyl-[2-(trimethyl-$l^{4}-azanyl)ethoxy]phosphoryl]oxy-propyl] hexadecanoate · ligand · chains R
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7WU3 · Cryo-EM structure of the adhesion GPCR ADGRF1 in complex with miniGs · the same entry in another collection · chain R against R, TM-score 1.00
- P62873 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I)/G(S)/G(T)… · a predicted model of the same protein · chain B against A, TM-score 0.99
- P59768 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I)/G(S)/G(O)… · a predicted model of the same protein · chain C against A, TM-score 0.92
- Q5T601 · AlphaFold monomer V2.0 prediction for adhesion G-protein coupled receptor F1 (Q5T601) · a predicted model of the same protein · chain R against A, TM-score 0.83
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P62873
- Every structure of UniProt P59768
- Every structure of UniProt Q5T601
- Elsewhere: RCSB PDB 7WU3 · PDBe 7WU3 · UniProt P62873 · UniProt P59768 · UniProt Q5T601
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.