Research workbench
Integrin ALAPHIIBBETA3 complex with crgdfv
Analyse Integrin ALAPHIIBBETA3 complex with crgdfv in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7U60
- Type
- protein
- Length
- 2,711 residues
- Chains
- 10
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P08514, P05106
- Ligands
- NAG, MAN, CA, MN, SO4
Structure
x-ray diffraction · 7 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 455 | — | P08514 |
| B | — | protein | 464 | — | P05106 |
| C | — | protein | 453 | — | P08514 |
| D | — | protein | 469 | — | P05106 |
| E, H | — | protein | 216 | — | — |
| F, L | — | protein | 214 | — | — |
| M, N | — | protein | 5 | — | — |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 10 copies · chains A, B, C, D
- MAN · alpha-D-mannopyranose · sugar · 4 copies · chains A, C
- CA · Calcium ion · metal · 8 copies · chains A, C
- MN · Manganese (II) ion · metal · 6 copies · chains B, M, D, N
- SO4 · Sulfate ion · ion · 8 copies · chains A, B, C, L
- GOL · Glycerol · additive · 11 copies · chains A, B, C, D, H, L
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7U60 · Integrin alpha IIB beta3 complex with cRGDfV · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P08514
- Every structure of UniProt P05106
- Elsewhere: RCSB PDB 7U60 · PDBe 7U60 · UniProt P08514 · UniProt P05106
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