Research workbench
Cryo-EM structure of the LIN28B nucleosome core particle
Analyse Cryo-EM structure of the LIN28B nucleosome core particle in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7NL0
- Type
- protein + DNA
- Length
- 1,017 residues
- Chains
- 10
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P68431, P62805, P04908, P06899
Structure
electron microscopy · 9 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 98 | — | P68431 |
| B | — | protein | 79 | — | P62805 |
| C | — | protein | 105 | — | P04908 |
| D, H | — | protein | 95 | — | P06899 |
| E | — | protein | 97 | — | P68431 |
| F | — | protein | 80 | — | P62805 |
| G | — | protein | 106 | — | P04908 |
| I | — | dna | 131 | — | — |
| J | — | dna | 131 | — | — |
Compared structures
- 7NL0 · Cryo-EM structure of the Lin28B nucleosome core particle · the same entry in another collection · chain J against J, TM-score 1.00
- P68431 · AlphaFold monomer V2.0 prediction for histone H3.1 (P68431) · a predicted model of the same protein · chain A against A, TM-score 0.99
- P06899 · AlphaFold monomer V2.0 prediction for histone H2B type 1-J (P06899) · a predicted model of the same protein · chain D against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P68431
- Every structure of UniProt P62805
- Every structure of UniProt P04908
- Every structure of UniProt P06899
- Elsewhere: RCSB PDB 7NL0 · PDBe 7NL0 · UniProt P68431 · UniProt P62805 · UniProt P04908 · UniProt P06899
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