Research workbench
Escherichia COLI sigma 70-dependent paused transcription elongation complex
Analyse Escherichia COLI sigma 70-dependent paused transcription elongation complex in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7N4E
- Type
- protein + DNA + RNA
- Length
- 3,648 residues
- Chains
- 9
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A073G207, P0A8V4, A0A4S1NBU2, P0A802, Q0P6L9
- Ligands
- ZN, MG
Structure
electron microscopy · 9 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| 1 | — | dna | 38 | — | — |
| 2 | — | dna | 41 | — | — |
| A | — | protein | 230 | — | A0A073G207 |
| B | — | protein | 228 | — | A0A073G207 |
| C | — | protein | 1340 | — | P0A8V4 |
| D | — | protein | 1327 | — | A0A4S1NBU2 |
| E | — | protein | 75 | — | P0A802 |
| F | — | protein | 359 | — | Q0P6L9 |
| R | — | rna | 10 | — | — |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7N4E · Escherichia coli sigma 70-dependent paused transcription elongation complex · the same entry in another collection · chain R against R, TM-score 1.00
- P0A802 · AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit omega (P0A802) · a predicted model of the same protein · chain E against A, TM-score 0.95
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A073G207
- Every structure of UniProt P0A8V4
- Every structure of UniProt A0A4S1NBU2
- Every structure of UniProt P0A802
- Every structure of UniProt Q0P6L9
- Elsewhere: RCSB PDB 7N4E · PDBe 7N4E · UniProt A0A073G207 · UniProt P0A8V4 · UniProt A0A4S1NBU2 · UniProt P0A802 · UniProt Q0P6L9
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