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Cryo-EM structure of the human nucleosome core particle with linked histone proteins H2A and H2B

Analyse Cryo-EM structure of the human nucleosome core particle with linked histone… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
7LYA
Type
protein + DNA
Length
1,060 residues
Chains
10
Method
electron microscopy
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P68431, P62805, P06899, P04908

Structure

electron microscopy · 8 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A, E—protein99—P68431
B, F—protein82—P62805
D—protein95—P06899
H—protein93—P06899
I—dna147——
J—dna146——
C—protein109—P04908
G—protein108—P04908

Compared structures

  • 7LYA · Cryo-EM structure of the human nucleosome core particle with linked histone proteins H2A… · the same entry in another collection · chain G against G, TM-score 1.00
  • P06899 · AlphaFold monomer V2.0 prediction for histone H2B type 1-J (P06899) · a predicted model of the same protein · chain H against A, TM-score 0.98
  • P68431 · AlphaFold monomer V2.0 prediction for histone H3.1 (P68431) · a predicted model of the same protein · chain E against A, TM-score 0.97

Analyse

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