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C-type carbohydrate-recognition domain 4 of the mannose receptor complexed with man-ALPHA1-2MAN

Analyse C-type carbohydrate-recognition domain 4 of the mannose receptor complexed with… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
7JUE
Type
protein
Length
135 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Macrophage mannose receptor 1
UniProt
P22897
Ligands
MAN, CA

Structure

x-ray diffraction · 1 distinct chain · 20% helix, 25% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AMacrophage mannose receptor 1protein13520% helix, 25% strandP22897

Ligands and binding sites

  • MAN · alpha-D-mannopyranose · sugar · 2 copies · chains A
  • CA · Calcium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 3 disulfide (disulfide).

Compared structures

  • 7JUE · C-type carbohydrate-recognition domain 4 of the mannose receptor complexed with… · the same entry in another collection · chain A against A, TM-score 1.00
  • P22897 · AlphaFold monomer V2.0 prediction for macrophage mannose receptor 1 (P22897) · a predicted model of the same protein · chain A against A, TM-score 0.94

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