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14-3-3 sigma in complex with phosphorylated SOS1 peptide

Analyse 14-3-3 sigma in complex with phosphorylated SOS1 peptide in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
6Y44
Type
protein
Length
236 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
14-3-3 protein sigma; Son of sevenless homolog 1
UniProt
P31947, Q07889
Ligands
MG, CA, CL

Structure

x-ray diffraction · 2 distinct chains · 78% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
A14-3-3 protein sigmaprotein22781% helix, 0% strandP31947
PSon of sevenless homolog 1protein90% helix, 0% strandQ07889

Ligands and binding sites

  • MG · Magnesium ion · metal · 3 copies · chains A
  • CA · Calcium ion · metal · chains A
  • CL · Chloride ion · ion · 4 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

  • A–P · 737 Ų buried · 14 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 2 modified (oxidation, phosphorylation).

Compared structures

  • 6Y44 · 14-3-3 Sigma in complex with phosphorylated SOS1 peptide · the same entry in another collection · chain A against A, TM-score 1.00
  • P31947 · AlphaFold monomer V2.0 prediction for 14-3-3 protein sigma (P31947) · a predicted model of the same protein · chain A against A, TM-score 0.96

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