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Crystal structure of the wbkc N-formyltransferase from brucella melitensis in complex with GDP-perosaminea and N-10- formyltetrahydrofolate
Analyse Crystal structure of the wbkc N-formyltransferase from brucella melitensis in… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5VYU
- Type
- protein
- Length
- 488 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- F8WJP6
- Ligands
- 1YA, JB2, GDP
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 244 | — | F8WJP6 |
| B | — | protein | 244 | — | F8WJP6 |
Ligands and binding sites
- 1YA · N-{4-[{[(6S)-2-amino-4-oxo-3,4,5,6,7,8-hexahydropteridin-6-yl]methyl}(formyl)amino]benzoyl}-L-glutamic acid · ligand · 2 copies · chains A, B
- JB2 · GDP-perosamine · ligand · chains A
- GDP · Guanosine-5'-diphosphate · ligand · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5VYU · Crystal structure of the WbkC N-formyltransferase from Brucella melitensis in complex… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt F8WJP6
- Elsewhere: RCSB PDB 5VYU · PDBe 5VYU · UniProt F8WJP6
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