Research workbench
Structure of the 30S pre-initiation complex 2 (30S ic-2) stalled by GE81112
Analyse Structure of the 30S pre-initiation complex 2 (30S ic-2) stalled by GE81112 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5ME1
- Type
- protein + RNA
- Length
- 4,732 residues
- Chains
- 26
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P0A7V0, P0A7V3, P0A7V8, P0A7W1, P02358, P02359, P0A7W7, P0A7X3, P0A7R5, P0A7R9, P0A7S3, P0A7S9, P0AG59, P0ADZ4, D8AGC4, P0AG63, P0A7T7, P0A7U3, P0A7U7, P68679, Q5SHR1, P0A705, P03000, A0A192C6K3
- Ligands
- FME
Structure
electron microscopy · 26 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | rna | 1534 | — | — |
| B | — | protein | 224 | — | P0A7V0 |
| C | — | protein | 206 | — | P0A7V3 |
| D | — | protein | 205 | — | P0A7V8 |
| E | — | protein | 155 | — | P0A7W1 |
| F | — | protein | 106 | — | P02358 |
| G | — | protein | 151 | — | P02359 |
| H | — | protein | 129 | — | P0A7W7 |
| I | — | protein | 127 | — | P0A7X3 |
| J | — | protein | 99 | — | P0A7R5 |
| K | — | protein | 117 | — | P0A7R9 |
| L | — | protein | 123 | — | P0A7S3 |
| M | — | protein | 114 | — | P0A7S9 |
| N | — | protein | 100 | — | P0AG59 |
| O | — | protein | 88 | — | P0ADZ4 |
| P | — | protein | 82 | — | D8AGC4 |
| Q | — | protein | 80 | — | P0AG63 |
| R | — | protein | 55 | — | P0A7T7 |
| S | — | protein | 79 | — | P0A7U3 |
| T | — | protein | 86 | — | P0A7U7 |
| U | — | protein | 56 | — | P68679 |
| V | — | protein | 71 | — | Q5SHR1 |
| W | — | protein | 501 | — | P0A705 |
| Y | — | protein | 76 | — | P03000 |
| Z | — | protein | 91 | — | A0A192C6K3 |
| X | — | rna | 77 | — | — |
Ligands and binding sites
- FME · N-formylmethionine · ligand · chains W, X
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5ME1 · Structure of the 30S Pre-Initiation Complex 2 (30S IC-2) Stalled by GE81112 · the same entry in another collection · chain J against J, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0A7V0
- Every structure of UniProt P0A7V3
- Every structure of UniProt P0A7V8
- Every structure of UniProt P0A7W1
- Every structure of UniProt P02358
- Every structure of UniProt P02359
- Every structure of UniProt P0A7W7
- Every structure of UniProt P0A7X3
- Every structure of UniProt P0A7R5
- Every structure of UniProt P0A7R9
- Every structure of UniProt P0A7S3
- Every structure of UniProt P0A7S9
- Every structure of UniProt P0AG59
- Every structure of UniProt P0ADZ4
- Every structure of UniProt D8AGC4
- Every structure of UniProt P0AG63
- Every structure of UniProt P0A7T7
- Every structure of UniProt P0A7U3
- Every structure of UniProt P0A7U7
- Every structure of UniProt P68679
- Every structure of UniProt Q5SHR1
- Every structure of UniProt P0A705
- Every structure of UniProt P03000
- Every structure of UniProt A0A192C6K3
- Elsewhere: RCSB PDB 5ME1 · PDBe 5ME1 · UniProt P0A7V0 · UniProt P0A7V3 · UniProt P0A7V8 · UniProt P0A7W1 · UniProt P02358 · UniProt P02359 · UniProt P0A7W7 · UniProt P0A7X3 · UniProt P0A7R5 · UniProt P0A7R9 · UniProt P0A7S3 · UniProt P0A7S9 · UniProt P0AG59 · UniProt P0ADZ4 · UniProt D8AGC4 · UniProt P0AG63 · UniProt P0A7T7 · UniProt P0A7U3 · UniProt P0A7U7 · UniProt P68679 · UniProt Q5SHR1 · UniProt P0A705 · UniProt P03000 · UniProt A0A192C6K3
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