UniProt P0ADZ4
30S ribosomal protein S15 (P0ADZ4)
30S ribosomal protein S15 (UniProt P0ADZ4): 282 experimental structures and 1 predicted model on GenesisL1, 3 ligands bound, 82 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P0ADZ4
- Protein
- 30S ribosomal protein S15
- Experimental structures
- 282
- Predicted models
- 1
- Ligands
- 3
- Pockets
- 82 · 48 records with a druggable one
Structures
283 records of P0ADZ4 in the MolNFT archive: 282 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 2VAZ | Model of the S15-mRNA complex fitted into the cryo-EM map of the 70S entrapment complex. | electron microscopy | F | — | — |
| 2VAZ | Model of the S15-mRNA complex fitted into the cryo-EM MAP of the 70S entrapment complex. | electron microscopy | F | — | — |
| 3J9Y | Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosome | electron microscopy | o | — | — |
| 3JBU | Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps | electron microscopy | O | — | — |
| 3JCD | Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4) | electron microscopy | o | — | — |
| 3JCE | Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4) | electron microscopy | o | — | — |
| 3JCJ | Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association | electron microscopy | u | — | — |
| 3JCN | Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association… | electron microscopy | p | — | — |
| 4U1U | Crystal structure of the E. coli ribosome bound to quinupristin. | x-ray diffraction | AO, CO | — | — |
| 4U1V | Crystal structure of the E. coli ribosome bound to linopristin. | x-ray diffraction | AO, CO | — | — |
| 4U20 | Crystal structure of the E. coli ribosome bound to flopristin. | x-ray diffraction | AO, CO | — | — |
| 4U24 | Crystal structure of the E. coli ribosome bound to dalfopristin. | x-ray diffraction | AO, CO | — | — |
| 4U25 | Crystal structure of the E. coli ribosome bound to virginiamycin M1. | x-ray diffraction | AO, CO | — | — |
| 4U26 | Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin. | x-ray diffraction | AO, CO | — | — |
| 4U27 | Crystal structure of the E. coli ribosome bound to flopristin and linopristin. | x-ray diffraction | AO, CO | — | — |
| 4V4V | Structure of a pre-translocational E. coli ribosome obtained by fitting atomic models for RNA and… | electron microscopy | AO | — | — |
| 4V4W | Structure of a SecM-stalled E. coli ribosome complex obtained by fitting atomic models for RNA and… | electron microscopy | AO | — | — |
| 4V52 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin. | x-ray diffraction | AO, CO | — | — |
| 4V53 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin. | x-ray diffraction | AO, CO | — | — |
| 4V54 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome… | x-ray diffraction | AO, CO | — | — |
| 4V55 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and… | x-ray diffraction | AO, CO | — | — |
| 4V56 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin. | x-ray diffraction | AO, CO | — | — |
| 4V57 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and… | x-ray diffraction | AO, CO | — | — |
| 4V5Y | Crystal structure of the bacterial ribosome from Escherichia coli in complex with paromomycin and… | x-ray diffraction | AO, CO | — | — |
| 4V6C | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | x-ray diffraction | AO, CO | — | — |
| 4V6D | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | x-ray diffraction | AO, CO | — | — |
| 4V6E | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | x-ray diffraction | AO, CO | — | — |
| 4V6M | Structure of the ribosome-SecYE complex in the membrane environment | electron microscopy | AM | — | — |
| 4V6T | Structure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and… | electron microscopy | AO | — | — |
| 4V6V | Tetracycline resistance protein Tet(O) bound to the ribosome | electron microscopy | AO | — | — |
| 4V6Y | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a) | electron microscopy | AO | — | — |
| 4V6Z | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b) | electron microscopy | AO | — | — |
| 4V70 | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3) | electron microscopy | AO | — | — |
| 4V71 | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre2) | electron microscopy | AO | — | — |
| 4V72 | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4) | electron microscopy | AO | — | — |
| 4V73 | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5a) | electron microscopy | AO | — | — |
| 4V74 | 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b) | electron microscopy | AO | — | — |
| 4V75 | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1) | electron microscopy | AO | — | — |
| 4V76 | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a) | electron microscopy | AO | — | — |
| 4V77 | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b) | electron microscopy | AO | — | — |
| 4V78 | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a) | electron microscopy | AO | — | — |
| 4V79 | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b) | electron microscopy | AO | — | — |
| 4V7A | E. coli 70S-fMetVal-tRNAVal post-translocation complex (post4) | electron microscopy | AO | — | — |
| 4V7B | Visualization of two tRNAs trapped in transit during EF-G-mediated translocation | electron microscopy | AO | — | — |
| 4V7C | Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State… | electron microscopy | AO | — | — |
| 4V7D | Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State… | electron microscopy | BO | — | — |
| 4V7S | Crystal structure of the E. coli ribosome bound to telithromycin. | x-ray diffraction | AO, CO | — | — |
| 4V7T | Crystal structure of the E. coli ribosome bound to chloramphenicol. | x-ray diffraction | AO, CO | — | — |
| 4V7U | Crystal structure of the E. coli ribosome bound to erythromycin. | x-ray diffraction | AO, CO | — | — |
| 4V7V | Crystal structure of the E. coli ribosome bound to clindamycin. | x-ray diffraction | AO, CO | — | — |
| 4V89 | Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the… | x-ray diffraction | AO | — | — |
| 4V9C | Allosteric control of the ribosome by small-molecule antibiotics | x-ray diffraction | AO, CO | — | — |
| 4V9D | Structures of the bacterial ribosome in classical and hybrid states of tRNA binding | x-ray diffraction | AO, BO | — | — |
| 4V9O | Control of ribosomal subunit rotation by elongation factor G | x-ray diffraction | BO, DO, FO, HO | — | — |
| 4V9P | Control of ribosomal subunit rotation by elongation factor G | x-ray diffraction | BO, DO, FO, HO | — | — |
| 4YBB | High-resolution structure of the Escherichia coli ribosome | x-ray diffraction | AO, BO | — | — |
| 5H5U | Mechanistic insights into the alternative translation termination by ArfA and RF2 | electron microscopy | v | — | — |
| 5IQR | Structure of RelA bound to the 70S ribosome | electron microscopy | t | — | — |
| 5IT8 | High-resolution structure of the Escherichia coli ribosome | x-ray diffraction | AO, BO | — | — |
| 5J5B | Structure of the WT E coli ribosome bound to tetracycline | x-ray diffraction | AO, BO | — | — |
223 records more on the page itself.
Ligands
Experiment against prediction
- 5MDW chain t against the predicted model P0ADZ4: TM-score 0.97, RMSD 0.65 Å
- 5MDZ chain t against the predicted model P0ADZ4: TM-score 0.97, RMSD 0.66 Å
- 5MDY chain t against the predicted model P0ADZ4: TM-score 0.97, RMSD 0.66 Å
- 5MDV chain t against the predicted model P0ADZ4: TM-score 0.97, RMSD 0.68 Å
- 5IQR chain t against the predicted model P0ADZ4: TM-score 0.96, RMSD 0.69 Å
- 5IT8 chain AO against the predicted model P0ADZ4: TM-score 0.96, RMSD 0.72 Å
- 5J5B chain AO against the predicted model P0ADZ4: TM-score 0.96, RMSD 0.73 Å
- 5J7L chain AO against the predicted model P0ADZ4: TM-score 0.96, RMSD 0.74 Å
- 5JC9 chain AO against the predicted model P0ADZ4: TM-score 0.96, RMSD 0.75 Å
- 7ACR chain t against the predicted model P0ADZ4: TM-score 0.96, RMSD 0.74 Å
Elsewhere
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