Research workbench
Heterotrimeric complex of the 4 alanine insertion variant of the gi ALPHA1 subunit and the GBETA1-GGAMMA1
Analyse Heterotrimeric complex of the 4 alanine insertion variant of the gi ALPHA1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5KDO
- Type
- protein
- Length
- 731 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P10824, P62871, P02698
- Ligands
- GDP
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 340 | — | P10824 |
| B | — | protein | 335 | — | P62871 |
| G | — | protein | 56 | — | P02698 |
Ligands and binding sites
- GDP · Guanosine-5'-diphosphate · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5KDO · Heterotrimeric complex of the 4 alanine insertion variant of the Gi alpha1 subunit and… · the same entry in another collection · chain B against B, TM-score 1.00
- P62871 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I)/G(S)/G(T)… · a predicted model of the same protein · chain B against A, TM-score 0.99
- P02698 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(T) subunit… · a predicted model of the same protein · chain G against A, TM-score 0.94
- P10824 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I) subunit… · a predicted model of the same protein · chain A against A, TM-score 0.92
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P10824
- Every structure of UniProt P62871
- Every structure of UniProt P02698
- Elsewhere: RCSB PDB 5KDO · PDBe 5KDO · UniProt P10824 · UniProt P62871 · UniProt P02698
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