Research workbench
AlphaFold monomer V2.0 prediction for small glutamine-rich tetratricopeptide repeat-containing protein 2 (Q12118)
Analyse AlphaFold monomer V2.0 prediction for small glutamine-rich tetratricopeptide… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q12118
- Type
- protein
- Length
- 346 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x422f92Ed16F3e38E0Df945A0deE92D80fCDFD0FB
- Molecule
- Small glutamine-rich tetratricopeptide repeat-containing protein 2
- UniProt
- Q12118
- Pockets
- 1 · best druggability 0.26
Structure
1 distinct chain · 65% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Small glutamine-rich tetratricopeptide repeat-containing protein 2 | protein | 346 | 65% helix, 0% strand | Q12118 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 50 | 0.26 | 0.74 | 11 | empty |
Compared structures
- 5LYP · Crystal structure of the Tpr Domain of Sgt2. · an experimental structure of the same protein · chain A against A, TM-score 0.38
- 5LYP · Crystal structure of the tpr domain of SGT2. · an experimental structure of the same protein · chain A against A, TM-score 0.38
- 5LYN · Structure of the tpr domain of SGT2 in complex with yeast SSA1 peptide fragment · an experimental structure of the same protein · chain A against A, TM-score 0.38
- 5LYN · Structure of the Tpr Domain of Sgt2 in complex with yeast Ssa1 peptide fragment · an experimental structure of the same protein · chain A against A, TM-score 0.38
- 4ASW · Structure of the complex between the N-terminal dimerisation domain of SGT2 and the ubl… · an experimental structure of the same protein · chain A against A, TM-score 0.21
- 4ASW · Structure of the complex between the N-terminal dimerisation domain of Sgt2 and the UBL… · an experimental structure of the same protein · chain A against A, TM-score 0.21
- 4ASV · Solution structure of the N-terminal dimerisation domain of SGT2 · an experimental structure of the same protein · chain A against A, TM-score 0.21
- 4ASV · Solution structure of the N-terminal dimerisation domain of Sgt2 · an experimental structure of the same protein · chain A against A, TM-score 0.21
- 2LXB · Solution structure of the Sgt2 homodimerization domain · an experimental structure of the same protein · chain A against A, TM-score 0.18
- 2LXB · Solution structure of the SGT2 homodimerization domain · an experimental structure of the same protein · chain A against A, TM-score 0.18
- 3ZDM · Crystal structure of the Sgt2 N domain and the Get5 UBL domain complex · an experimental structure of the same protein · chain A against A, TM-score 0.17
- 3ZDM · Crystal structure of the SGT2 N domain and the GET5 ubl domain complex · an experimental structure of the same protein · chain A against A, TM-score 0.17
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q12118
- Elsewhere: UniProt Q12118 · AlphaFold DB Q12118
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.