AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit methyltransferase a (P37468)

Structure

1 distinct chain · 45% helix, 18% strand (DSSP).

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Compared structures

• 6IFT · KsgA from Bacillus subtilis in complex with SAM · an experimental structure of the same protein · chain A against A, TM-score 0.99
• 6IFT · Ksga from bacillus subtilis in complex with SAM · an experimental structure of the same protein · chain A against A, TM-score 0.99
• 6IFS · KsgA from Bacillus subtilis 168 · an experimental structure of the same protein · chain A against B, TM-score 0.93
• 6IFS · Ksga from bacillus subtilis 168 · an experimental structure of the same protein · chain A against B, TM-score 0.93
• 7V2M · T.thermophilus 30S ribosome with KsgA, class K1k4 · an experimental structure of the same protein · chain A against U, TM-score 0.92
• 7V2M · T.THERMOPHILUS 30S ribosome with ksga, class K1K4 · an experimental structure of the same protein · chain A against U, TM-score 0.92
• 7V2P · T.THERMOPHILUS 30S ribosome with ksga, class K5 · an experimental structure of the same protein · chain A against U, TM-score 0.91
• 7V2P · T.thermophilus 30S ribosome with KsgA, class K5 · an experimental structure of the same protein · chain A against U, TM-score 0.91
• 6IFW · Crystal structure of chimeric construct of ksga with loop 1 from erm · an experimental structure of the same protein · chain A against A, TM-score 0.88
• 6IFW · crystal structure of chimeric construct of KsgA with loop 1 from erm · an experimental structure of the same protein · chain A against A, TM-score 0.88

Analyse

• Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
• Every structure of UniProt P37468
• Elsewhere: UniProt P37468 · AlphaFold DB P37468