Research workbench
AlphaFold monomer V2.0 prediction for 39S ribosomal protein L35, mitochondrial (Q9NZE8)
Analyse AlphaFold monomer V2.0 prediction for 39S ribosomal protein L35, mitochondrial… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9NZE8
- Type
- protein
- Length
- 188 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x927Dca1Cb01AabDcD7D05D93F2C57435a5C5C603
- Molecule
- 39S ribosomal protein L35, mitochondrial
- UniProt
- Q9NZE8
- Pockets
- 1 · best druggability 0.45
Structure
1 distinct chain · 22% helix, 5% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 39S ribosomal protein L35, mitochondrial | protein | 188 | 22% helix, 5% strand | Q9NZE8 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 110 | 0.45 | 0.78 | 23 | empty |
Compared structures
- 6NU2 · Structural insights into unique features of the human mitochondrial ribosome recycling · an experimental structure of the same protein · chain A against 3, TM-score 0.50
- 7OI8 · Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3A · an experimental structure of the same protein · chain A against 3, TM-score 0.50
- 7OI8 · Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3A · an experimental structure of the same protein · chain A against 3, TM-score 0.50
- 5OOL · Structure of a native assembly intermediate of the human mitochondrial ribosome with… · an experimental structure of the same protein · chain A against 3, TM-score 0.50
- 5OOL · Structure of a native assembly intermediate of the human mitochondrial ribosome with… · an experimental structure of the same protein · chain A against 3, TM-score 0.50
- 7L20 · Cryo-EM structure of the human 39S mitoribosomal subunit in complex with RRFmt and… · an experimental structure of the same protein · chain A against 3, TM-score 0.50
- 3J9M · Structure of the human mitochondrial ribosome (class 1) · an experimental structure of the same protein · chain A against 3, TM-score 0.50
- 6NU3 · Structural insights into unique features of the human mitochondrial ribosome recycling · an experimental structure of the same protein · chain A against 3, TM-score 0.50
- 7ODT · State C of the human mitoribosomal large subunit assembly intermediate · an experimental structure of the same protein · chain A against 3, TM-score 0.50
- 7QH7 · Cryo-EM structure of the human mtLSU assembly intermediate upon MRM2 depletion - class 4 · an experimental structure of the same protein · chain A against 3, TM-score 0.50
- 7QH7 · Cryo-EM structure of the human mtlsu assembly intermediate upon MRM2 depletion - class 4 · an experimental structure of the same protein · chain A against 3, TM-score 0.50
- 8PK0 · human mitoribosomal large subunit assembly intermediate 1 with GTPBP10-GTPBP7 · an experimental structure of the same protein · chain A against 3, TM-score 0.50
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9NZE8
- Elsewhere: UniProt Q9NZE8 · AlphaFold DB Q9NZE8
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