Research workbench
AlphaFold monomer V2.0 prediction for nucleoporin NUP192 (G0S4T0)
Analyse AlphaFold monomer V2.0 prediction for nucleoporin NUP192 (G0S4T0) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- G0S4T0
- Type
- protein
- Length
- 1,756 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xA1740d814B84975811C96baED2801952BAEf63bb
- Molecule
- Nucleoporin NUP192
- UniProt
- G0S4T0
- Pockets
- 20 · best druggability 0.68
Structure
1 distinct chain · 64% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nucleoporin NUP192 | protein | 1756 | 64% helix, 2% strand | G0S4T0 |
Pockets
20 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 704 | 0.68 | 0.76 | 74 | empty |
| 2 | 635 | 0.67 | 0.76 | 66 | empty |
| 3 | 477 | 0.65 | 0.77 | 38 | empty |
| 4 | 360 | 0.60 | 0.77 | 47 | empty |
| 5 | 156 | 0.57 | 0.82 | 26 | empty |
Compared structures
- 7MVU · Single particle cryo-EM structure of the chaetomium thermophilum NUP192-NIC96 complex… · an experimental structure of the same protein · chain A against A, TM-score 0.79
- 7MVU · Single particle cryo-EM structure of the Chaetomium thermophilum Nup192-Nic96 complex… · an experimental structure of the same protein · chain A against A, TM-score 0.79
- 5HB4 · Crystal structure of Chaetomium thermophilum Nup192 · an experimental structure of the same protein · chain A against B, TM-score 0.79
- 5HB4 · Crystal structure of chaetomium thermophilum NUP192 · an experimental structure of the same protein · chain A against B, TM-score 0.79
- 7MVV · Single particle cryo-EM structure of the chaetomium thermophilum… · an experimental structure of the same protein · chain A against A, TM-score 0.78
- 7MVV · Single particle cryo-EM structure of the Chaetomium thermophilum… · an experimental structure of the same protein · chain A against A, TM-score 0.78
- 7MVT · Crystal structure of the chaetomium thermophilum NUP192-NIC96 complex (NUP192 residues… · an experimental structure of the same protein · chain A against A, TM-score 0.74
- 7MVT · Crystal structure of the Chaetomium thermophilum Nup192-Nic96 complex (Nup192 residues… · an experimental structure of the same protein · chain A against A, TM-score 0.74
- 5CWV · Crystal structure of chaetomium thermophilum NUP192 tail domain · an experimental structure of the same protein · chain A against A, TM-score 0.15
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt G0S4T0
- Elsewhere: UniProt G0S4T0 · AlphaFold DB G0S4T0
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.