Research workbench
AlphaFold monomer V2.0 prediction for nucleoporin NUP170 (G0S7B6)
Analyse AlphaFold monomer V2.0 prediction for nucleoporin NUP170 (G0S7B6) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- G0S7B6
- Type
- protein
- Length
- 1,416 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4d07E6a23DeB6B95bd9b90EcB67368b7e8D3B77e
- Molecule
- Nucleoporin NUP170
- UniProt
- G0S7B6
- Pockets
- 15 · best druggability 0.78
Structure
1 distinct chain · 46% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nucleoporin NUP170 | protein | 1416 | 46% helix, 15% strand | G0S7B6 |
Pockets
15 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1119 | 0.78 | 0.80 | 57 | empty |
| 2 | 91 | 0.72 | 0.95 | 32 | empty |
| 3 | 312 | 0.52 | 0.74 | 33 | empty |
| 4 | 255 | 0.50 | 0.74 | 40 | empty |
| 5 | 216 | 0.46 | 0.74 | 33 | empty |
Compared structures
- 5HAX · Crystal structure of Chaetomium thermophilum Nup170 NTD-Nup53 complex · an experimental structure of the same protein · chain A against A, TM-score 0.49
- 5HAX · Crystal structure of chaetomium thermophilum NUP170 ntd-NUP53 complex · an experimental structure of the same protein · chain A against A, TM-score 0.49
- 5HB1 · Crystal structure of Chaetomium thermophilum Nup170 SOL · an experimental structure of the same protein · chain A against A, TM-score 0.42
- 5HB1 · Crystal structure of chaetomium thermophilum NUP170 sol · an experimental structure of the same protein · chain A against A, TM-score 0.42
- 5HAY · Crystal structure of chaetomium thermophilum NUP170 ctd Y905M L1007M L1183M V1292M mutant · an experimental structure of the same protein · chain A against A, TM-score 0.35
- 5HAY · Crystal structure of Chaetomium thermophilum Nup170 CTD Y905M L1007M L1183M V1292M mutant · an experimental structure of the same protein · chain A against A, TM-score 0.35
- 5HAZ · Structure of chaetomium thermophilum NUP170 ctd · an experimental structure of the same protein · chain A against A, TM-score 0.34
- 5HAZ · Structure of Chaetomium thermophilum Nup170 CTD · an experimental structure of the same protein · chain A against A, TM-score 0.34
- 5HB0 · Crystal structure of Chaetomium thermophilum Nup170 CTD-Nup145N complex · an experimental structure of the same protein · chain A against A, TM-score 0.34
- 5HB0 · Crystal structure of chaetomium thermophilum NUP170 ctd-NUP145N complex · an experimental structure of the same protein · chain A against A, TM-score 0.34
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt G0S7B6
- Elsewhere: UniProt G0S7B6 · AlphaFold DB G0S7B6
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.