UniProt Q4WMJ8
Dipeptidase gliJ (Q4WMJ8)
Dipeptidase gliJ (UniProt Q4WMJ8), EC 3.4.13.19: 26 experimental structures and 1 predicted model on GenesisL1, 9 ligands bound, 19 pockets. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- Q4WMJ8
- Protein
- Dipeptidase gliJ
- EC
- 3.4.13.19
- Experimental structures
- 26
- Predicted models
- 1
- Ligands
- 9
- Pockets
- 19 · 0 records with a druggable one
Structures
27 records of Q4WMJ8 in the MolNFT archive: 26 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 5LWZ | Cys-Gly dipeptidase GliJ (space group C2) | x-ray diffraction | A, B, C | FE | — |
| 5LWZ | Cys-gly dipeptidase glij (space group C2) | x-ray diffraction | A, B, C | FE | — |
| 5LX0 | Cys-Gly dipeptidase GliJ (space group P3221) | x-ray diffraction | A | FE | — |
| 5LX0 | Cys-gly dipeptidase glij (space group P3221) | x-ray diffraction | A | FE | — |
| 5LX1 | Cys-Gly dipeptidase GliJ mutant D304A | x-ray diffraction | A | FE | — |
| 5LX1 | Cys-gly dipeptidase glij mutant D304A | x-ray diffraction | A | FE | — |
| 5LX4 | Cys-Gly dipeptidase GliJ mutant D38H | x-ray diffraction | A | FE | 3 (best 0.36) |
| 5LX4 | Cys-gly dipeptidase glij mutant D38H | x-ray diffraction | A | FE | — |
| 5LX7 | Cys-Gly dipeptidase GliJ mutant D38N | x-ray diffraction | A | FE | — |
| 5LX7 | Cys-gly dipeptidase glij mutant D38N | x-ray diffraction | A | FE | — |
| 5NRT | Cys-Gly dipeptidase GliJ in complex with Ca2+ | x-ray diffraction | A | CA, MG | 3 (best 0.37) |
| 5NRT | Cys-gly dipeptidase glij in complex with CA2+ | x-ray diffraction | A | CA, MG | — |
| 5NRU | Cys-Gly dipeptidase GliJ in complex with Zn2+ | x-ray diffraction | A | ZN, CL | 3 (best 0.36) |
| 5NRU | Cys-gly dipeptidase glij in complex with ZN2+ | x-ray diffraction | A | ZN | — |
| 5NRX | Cys-Gly dipeptidase GliJ in complex with Fe2+ | x-ray diffraction | A | FE, CL | — |
| 5NRX | Cys-gly dipeptidase glij in complex with FE2+ | x-ray diffraction | A | FE, CL | — |
| 5NRY | Cys-Gly dipeptidase GliJ in complex with Fe3+ | x-ray diffraction | A | FE, CL | — |
| 5NRY | Cys-gly dipeptidase glij in complex with FE3+ | x-ray diffraction | A | FE, CL | — |
| 5NRZ | Cys-Gly dipeptidase GliJ in complex with Mn2+ | x-ray diffraction | A | MN, CL | — |
| 5NRZ | Cys-gly dipeptidase glij in complex with MN2+ | x-ray diffraction | A | MN, CL | — |
| 5NS1 | Cys-Gly dipeptidase GliJ in complex with Ni2+ | x-ray diffraction | A | NI | 4 (best 0.36) |
| 5NS1 | Cys-gly dipeptidase glij in complex with NI2+ | x-ray diffraction | A | NI | — |
| 5NS2 | Cys-Gly dipeptidase GliJ in complex with Co2+ | x-ray diffraction | A | CO, CL | 3 (best 0.35) |
| 5NS2 | Cys-gly dipeptidase glij in complex with CO2+ | x-ray diffraction | A | CO, CL | — |
| 5NS5 | Cys-Gly dipeptidase GliJ in complex with Cu2+ and Zn2+ | x-ray diffraction | A | ZN, CU, CL | 3 (best 0.36) |
| 5NS5 | Cys-gly dipeptidase glij in complex with CU2+ and ZN2+ | x-ray diffraction | A | ZN, CU, CL | — |
| Q4WMJ8 | AlphaFold monomer V2.0 prediction for dipeptidase glij (Q4WMJ8) | predicted | A | — | — |
Ligands
- FE · Fe (III) ion · in 14 records
- CL · Chloride ion · in 11 records
- ZN · Zinc ion · in 4 records
- CA · Calcium ion · in 2 records
- CO · Cobalt (II) ion · in 2 records
- CU · Copper (II) ion · in 2 records
- MG · Magnesium ion · in 2 records
- MN · Manganese (II) ion · in 2 records
- NI · Nickel (II) ion · in 2 records
Experiment against prediction
- 5LWZ chain B against the predicted model Q4WMJ8: TM-score 0.99, RMSD 0.64 Å
- 5LWZ chain B against the predicted model Q4WMJ8: TM-score 0.99, RMSD 0.64 Å
- 5LWZ chain C against the predicted model Q4WMJ8: TM-score 0.99, RMSD 0.66 Å
- 5LWZ chain C against the predicted model Q4WMJ8: TM-score 0.99, RMSD 0.66 Å
- 5LWZ chain A against the predicted model Q4WMJ8: TM-score 0.99, RMSD 0.66 Å
- 5LWZ chain A against the predicted model Q4WMJ8: TM-score 0.99, RMSD 0.66 Å
- 5LX1 chain A against the predicted model Q4WMJ8: TM-score 0.99, RMSD 0.64 Å
- 5LX1 chain A against the predicted model Q4WMJ8: TM-score 0.99, RMSD 0.64 Å
- 5NS2 chain A against the predicted model Q4WMJ8: TM-score 0.99, RMSD 0.69 Å
- 5NS2 chain A against the predicted model Q4WMJ8: TM-score 0.99, RMSD 0.69 Å
Elsewhere
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.